Increased temperatures alter viable microbial biomass, ammonia oxidizing bacteria and extracellular enzymatic activities in Antarctic soils

Affinity informs environmental cooperation between ammonia-oxidizing archaea (AOA) and anaerobic ammonia-oxidizing (Anammox) bacteria

(2019) Levi L. Straka et al.   ISME Journal

Scientists’ warning to humanity: microorganisms and climate change

(2019) Ricardo Cavicchioli et al.   NATURE REVIEWS MICROBIOLOGY

Nitrous oxide production by ammonia oxidizers: Physiological diversity, niche differentiation and potential mitigation strategies

(2019) James I. Prosser et al.   GLOBAL CHANGE BIOLOGY

Unifying the global phylogeny and environmental distribution of ammonia-oxidising archaea based on amoA genes

(2018) Ricardo J. Eloy Alves et al.   Nature Communications

A reservoir of ‘historical’ antibiotic resistance genes in remote pristine Antarctic soils

(2018) Marc W. Van Goethem et al.   Microbiome

Atmospheric trace gases support primary production in Antarctic desert surface soil

(2017) Mukan Ji et al.   NATURE

Soil nutritional status and biogeography influence rhizosphere microbial communities associated with the invasive tree Acacia dealbata

(2017) Casper N. Kamutando et al.   Scientific Reports

Environmental drivers of viral community composition in Antarctic soils identified by viromics

(2017) Evelien M. Adriaenssens et al.   Microbiome

Microbial diversity and functional capacity in polar soils

(2016) Thulani Peter Makhalanyane et al.   CURRENT OPINION IN BIOTECHNOLOGY

Contribution of ammonia oxidation to chemoautotrophy in Antarctic coastal waters

(2016) Bradley B Tolar et al.   ISME Journal

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Antarctic microbial communities are functionally redundant, adapted and resistant to short term temperature perturbations

(2016) S.Z. de Scally et al.   SOIL BIOLOGY & BIOCHEMISTRY

Managing uncertainty in soil carbon feedbacks to climate change

(2016) Mark A. Bradford et al.   Nature Climate Change

Ecology and biogeochemistry of cyanobacteria in soils, permafrost, aquatic and cryptic polar habitats

(2015) Thulani P. Makhalanyane et al.   BIODIVERSITY AND CONSERVATION

Explicitly representing soil microbial processes in Earth system models

(2015) William R. Wieder et al.   GLOBAL BIOGEOCHEMICAL CYCLES

Phospholipid fatty acid profiling of microbial communities-a review of interpretations and recent applications

(2015) C. Willers et al.   JOURNAL OF APPLIED MICROBIOLOGY

Soil carbon storage controlled by interactions between geochemistry and climate

(2015) Sebastian Doetterl et al.   Nature Geoscience

Nitrification kinetics and ammonia-oxidizing community respond to warming and altered precipitation

(2015) D. S. Novem Auyeung et al.   Ecosphere

Diversity and structure of soil bacterial communities in the Fildes Region (maritime Antarctica) as revealed by 454 pyrosequencing

(2015) Neng Fei Wang et al.   Frontiers in Microbiology

Microbial community composition of transiently wetted Antarctic Dry Valley soils

(2015) Thomas D. Niederberger et al.   Frontiers in Microbiology

Ammonia-oxidising bacteria not archaea dominate nitrification activity in semi-arid agricultural soil

(2015) Natasha C. Banning et al.   Scientific Reports

STAMP: statistical analysis of taxonomic and functional profiles

(2014) Donovan H. Parks et al.   BIOINFORMATICS

The interactive effects of soil transplant into colder regions and cropping on soil microbiology and biogeochemistry

(2014) Shanshan Liu et al.   ENVIRONMENTAL MICROBIOLOGY

Differential contributions of archaeal ammonia oxidizer ecotypes to nitrification in coastal surface waters

(2014) Jason M Smith et al.   ISME Journal

Characterization of Chasmoendolithic Community in Miers Valley, McMurdo Dry Valleys, Antarctica

(2014) Charmaine C. M. Yung et al.   MICROBIAL ECOLOGY

Temperature sensitivity of soil respiration rates enhanced by microbial community response

(2014) Kristiina Karhu et al.   NATURE

PERMANOVA, ANOSIM, and the Mantel test in the face of heterogeneous dispersions: What null hypothesis are you testing?

(2013) Marti J. Anderson et al.   ECOLOGICAL MONOGRAPHS

Loss in microbial diversity affects nitrogen cycling in soil

(2013) Laurent Philippot et al.   ISME Journal

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Functional ecology of an Antarctic Dry Valley

(2013) Y. Chan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Diversity and Expression of RubisCO Genes in a Perennially Ice-Covered Antarctic Lake during the Polar Night Transition

(2012) Weidong Kong et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Diverse and highly active diazotrophic assemblages inhabit ephemerally wetted soils of the Antarctic Dry Valleys

(2012) Thomas D. Niederberger et al.   FEMS MICROBIOLOGY ECOLOGY

Abiotic processes dominate CO2 fluxes in Antarctic soils

(2012) Fiona L. Shanhun et al.   SOIL BIOLOGY & BIOCHEMISTRY

Temperature and Moisture Effects on Microbial Biomass and Soil Organic Matter Mineralization

(2012) Denis Curtin et al.   SOIL SCIENCE SOCIETY OF AMERICA JOURNAL

Archaeal and bacterial ammonia-oxidisers in soil: the quest for niche specialisation and differentiation

(2012) James I. Prosser et al.   TRENDS IN MICROBIOLOGY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Quality control and preprocessing of metagenomic datasets

(2011) R. Schmieder et al.   BIOINFORMATICS

Autotrophic growth of nitrifying community in an agricultural soil

(2011) Weiwei Xia et al.   ISME Journal

A rapid DNA extraction method for PCR amplification from wetland soils

(2011) J. Li et al.   LETTERS IN APPLIED MICROBIOLOGY

Change in gene abundance in the nitrogen biogeochemical cycle with temperature and nitrogen addition in Antarctic soils

(2011) Jaejoon Jung et al.   RESEARCH IN MICROBIOLOGY

Archaea rather than bacteria control nitrification in two agricultural acidic soils

(2010) Cécile Gubry-Rangin et al.   FEMS MICROBIOLOGY ECOLOGY

Nitrifiers and denitrifiers respond rapidly to changed moisture and increasing temperature in a pristine forest soil

(2010) Ute Szukics et al.   FEMS MICROBIOLOGY ECOLOGY

Ammonia oxidation: different niches for bacteria and archaea?

(2010) Christa Schleper   ISME Journal

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

On the rocks: the microbiology of Antarctic Dry Valley soils

(2010) S. Craig Cary et al.   NATURE REVIEWS MICROBIOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Growth of ammonia-oxidizing archaea in soil microcosms is inhibited by acetylene

(2009) Pierre Offre et al.   FEMS MICROBIOLOGY ECOLOGY

Complete Genome Sequence of Nitrosospira multiformis, an Ammonia-Oxidizing Bacterium from the Soil Environment

(2008) J. M. Norton et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Stoichiometry of soil enzyme activity at global scale

(2008) Robert L. Sinsabaugh et al.   ECOLOGY LETTERS

Responses of Antarctic soil microbial communities and associated functions to temperature and freeze-thaw cycle frequency

(2008) Etienne Yergeau et al.   ENVIRONMENTAL MICROBIOLOGY

Relative contributions of archaea and bacteria to aerobic ammonia oxidation in the environment

(2008) James I. Prosser et al.   ENVIRONMENTAL MICROBIOLOGY

Abundance and composition of ammonia-oxidizing bacteria and ammonia-oxidizing archaea communities of an alkaline sandy loam

(2008) Ju-pei Shen et al.   ENVIRONMENTAL MICROBIOLOGY

Growth, activity and temperature responses of ammonia-oxidizing archaea and bacteria in soil microcosms

(2008) Maria Tourna et al.   ENVIRONMENTAL MICROBIOLOGY

Nitrification in terrestrial hot springs of Iceland and Kamchatka

(2008) Laila J. Reigstad et al.   FEMS MICROBIOLOGY ECOLOGY