Enhanced degradation of softwood versus hardwood by the white-rot fungus Pycnoporus coccineus

Influence of Populus Genotype on Gene Expression by the Wood Decay Fungus Phanerochaete chrysosporium

(2014) Jill Gaskell et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Temporal Alterations in the Secretome of the Selective Ligninolytic Fungus Ceriporiopsis subvermispora during Growth on Aspen Wood Reveal This Organism's Strategy for Degrading Lignocellulose

(2014) Chiaki Hori et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Fast solubilization of recalcitrant cellulosic biomass by the basidiomycete fungus Laetisaria arvalisinvolves successive secretion of oxidative and hydrolytic enzymes

(2014) David Navarro et al.   Biotechnology for Biofuels

The genome of the white-rot fungus Pycnoporus cinnabarinus: a basidiomycete model with a versatile arsenal for lignocellulosic biomass breakdown

(2014) Anthony Levasseur et al.   BMC GENOMICS

Genomics of wood-degrading fungi

(2014) Robin A. Ohm et al.   FUNGAL GENETICS AND BIOLOGY

Transcriptional analysis of selected cellulose-acting enzymes encoding genes of the white-rot fungus Dichomitus squalens on spruce wood and microcrystalline cellulose

(2014) Johanna Rytioja et al.   FUNGAL GENETICS AND BIOLOGY

Fungal Cytochrome P450 Monooxygenases: Their Distribution, Structure, Functions, Family Expansion, and Evolutionary Origin

(2014) Wanping Chen et al.   Genome Biology and Evolution

Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi

(2014) Robert Riley et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Analysis of the Phlebiopsis gigantea Genome, Transcriptome and Secretome Provides Insight into Its Pioneer Colonization Strategies of Wood

(2014) Chiaki Hori et al.   PLoS Genetics

Differential proteomic analysis of the secretome of Irpex lacteus and other white-rot fungi during wheat straw pretreatment

(2013) Davinia Salvachúa et al.   Biotechnology for Biofuels

Towards practical time-of-flight secondary ion mass spectrometry lignocellulolytic enzyme assays

(2013) Robyn E Goacher et al.   Biotechnology for Biofuels

A C4-oxidizing Lytic Polysaccharide Monooxygenase Cleaving Both Cellulose and Cello-oligosaccharides

(2013) Trine Isaksen et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Genomewide analysis of polysaccharides degrading enzymes in 11 white- and brown-rot Polyporales provides insight into mechanisms of wood decay

(2013) Chiaki Hori et al.   MYCOLOGIA

Lignin-degrading peroxidases in Polyporales: an evolutionary survey based on 10 sequenced genomes

(2013) Francisco J. Ruiz-Dueñas et al.   MYCOLOGIA

The carbohydrate-active enzymes database (CAZy) in 2013

(2013) Vincent Lombard et al.   NUCLEIC ACIDS RESEARCH

MycoCosm portal: gearing up for 1000 fungal genomes

(2013) Igor V. Grigoriev et al.   NUCLEIC ACIDS RESEARCH

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

Xenomic networks variability and adaptation traits in wood decaying fungi

(2013) Mélanie Morel et al.   Microbial Biotechnology

Application of Time-of-Flight-Secondary Ion Mass Spectrometry for the Detection of Enzyme Activity on Solid Wood Substrates

(2012) Robyn E. Goacher et al.   ANALYTICAL CHEMISTRY

Mode of coniferous wood decay by the white rot fungus Phanerochaete carnosa as elucidated by FTIR and ToF-SIMS

(2012) Sonam Mahajan et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize

(2012) Hitoshi Suzuki et al.   BMC GENOMICS

A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis

(2012) M.-A. Dillies et al.   BRIEFINGS IN BIOINFORMATICS

P450 monooxygenases (P450ome) of the model white rot fungusPhanerochaete chrysosporium

(2012) Khajamohiddin Syed et al.   CRITICAL REVIEWS IN MICROBIOLOGY

NCBI GEO: archive for functional genomics data sets—update

(2012) Tanya Barrett et al.   NUCLEIC ACIDS RESEARCH

Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis

(2012) E. Fernandez-Fueyo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes

(2012) D. Floudas et al.   SCIENCE

Chemical and Spatial Differentiation of Syringyl and Guaiacyl Lignins in Poplar Wood via Time-of-Flight Secondary Ion Mass Spectrometry

(2011) Chuanzhen Zhou et al.   ANALYTICAL CHEMISTRY

Transcriptomic Responses of the Softwood-Degrading White-Rot Fungus Phanerochaete carnosa during Growth on Coniferous and Deciduous Wood

(2011) Jacqueline MacDonald et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Significant Alteration of Gene Expression in Wood Decay Fungi Postia placenta and Phanerochaete chrysosporium by Plant Species

(2011) Amber Vanden Wymelenberg et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Time-Dependent Profiles of Transcripts Encoding Lignocellulose-Modifying Enzymes of the White Rot Fungus Phanerochaete carnosa Grown on Multiple Wood Substrates

(2011) Jacqueline MacDonald et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Peculiarities of Pycnoporus species for applications in biotechnology

(2011) Anne Lomascolo et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Direct mapping of morphological distribution of syringyl and guaiacyl lignin in the xylem of maple by time-of-flight secondary ion mass spectrometry

(2011) Kaori Saito et al.   PLANT JOURNAL

The Putative Endoglucanase PcGH61D from Phanerochaete chrysosporium Is a Metal-Dependent Oxidative Enzyme that Cleaves Cellulose

(2011) Bjørge Westereng et al.   PLoS One

Expanding the Library of Secondary Ions That Distinguish Lignin and Polysaccharides in Time-of-Flight Secondary Ion Mass Spectrometry Analysis of Wood

(2010) Robyn E. Goacher et al.   ANALYTICAL CHEMISTRY

Stimulation of Lignocellulosic Biomass Hydrolysis by Proteins of Glycoside Hydrolase Family 61: Structure and Function of a Large, Enigmatic Family

(2010) Paul V. Harris et al.   BIOCHEMISTRY

Automated assay for screening the enzymatic release of reducing sugars from micronized biomass

(2010) David Navarro et al.   Microbial Cell Factories

Woody biomass pretreatment for cellulosic ethanol production: Technology and energy consumption evaluation☆

(2009) J.Y. Zhu et al.   BIORESOURCE TECHNOLOGY

Secretome analysis of Phanerochaete chrysosporium strain CIRM-BRFM41 grown on softwood

(2008) Holy Ravalason et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY