Closely related fungi employ diverse enzymatic strategies to degrade plant biomass

Plant Cell Wall–Degrading Enzymes and Their Secretion in Plant-Pathogenic Fungi

(2014) Christian P. Kubicek et al.   Annual Review of Phytopathology

Complex regulation of hydrolytic enzyme genes for cellulosic biomass degradation in filamentous fungi

(2014) Shuji Tani et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Distinct mechanism of activation of two transcription factors, AmyR and MalR, involved in amylolytic enzyme production in Aspergillus oryzae

(2014) Kuta Suzuki et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

A genomic survey of proteases in Aspergilli

(2014) Sebnem Budak et al.   BMC GENOMICS

Prevalence of transcription factors in ascomycete and basidiomycete fungi

(2014) Richard B Todd et al.   BMC GENOMICS

Similar is not the same: Differences in the function of the (hemi-)cellulolytic regulator XlnR (Xlr1/Xyr1) in filamentous fungi

(2014) Sylvia Klaubauf et al.   FUNGAL GENETICS AND BIOLOGY

The carbohydrate-active enzymes database (CAZy) in 2013

(2013) Vincent Lombard et al.   NUCLEIC ACIDS RESEARCH

Comparison and characterization of α-amylase inducers in Aspergillus nidulans based on nuclear localization of AmyR

(2012) Yuriko Murakoshi et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

A novel transcriptional regulator, ClbR, controls the cellobiose- and cellulose-responsive induction of cellulase and xylanase genes regulated by two distinct signaling pathways in Aspergillus aculeatus

(2012) Emi Kunitake et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Expression and regulation of genes encoding lignocellulose-degrading activity in the genus Phanerochaete

(2012) Jacqueline MacDonald et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

XlnR-independent signaling pathway regulates both cellulase and xylanase genes in response to cellobiose in Aspergillus aculeatus

(2012) Shuji Tani et al.   CURRENT GENETICS

Uncovering the Genome-Wide Transcriptional Responses of the Filamentous Fungus Aspergillus niger to Lignocellulose Using RNA Sequencing

(2012) Stéphane Delmas et al.   PLoS Genetics

A broader role for AmyR in Aspergillus niger: regulation of the utilisation of d-glucose or d-galactose containing oligo- and polysaccharides

(2011) Patricia A. vanKuyk et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Regulation of pentose utilisation by AraR, but not XlnR, differs in Aspergillus nidulans and Aspergillus niger

(2011) Evy Battaglia et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Xylose Triggers Reversible Phosphorylation of XlnR, the Fungal Transcriptional Activator of Xylanolytic and Cellulolytic Genes inAspergillus oryzae

(2011) Yuji NOGUCHI et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Aiming for the complete utilization of sugar-beet pulp: Examination of the effects of mild acid and hydrothermal pretreatment followed by enzymatic digestion

(2011) Stefan Kühnel et al.   Biotechnology for Biofuels

Carbohydrate-active enzymes from the zygomycete fungus Rhizopus oryzae: a highly specialized approach to carbohydrate degradation depicted at genome level

(2011) Evy Battaglia et al.   BMC GENOMICS

Induction and Transcriptional Regulation of Laccases in Fungi

(2011) Alessandra Piscitelli et al.   CURRENT GENOMICS

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Identification of a Major Xylanase from Aspergillus flavus as a 14-kD Protein

(2011) Jay E. Mellon et al.   MYCOPATHOLOGIA

Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris

(2011) Randy M Berka et al.   NATURE BIOTECHNOLOGY

Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy

(2011) I. Letunic et al.   NUCLEIC ACIDS RESEARCH

The Plant Cell Wall-Decomposing Machinery Underlies the Functional Diversity of Forest Fungi

(2011) D. C. Eastwood et al.   SCIENCE

Analysis of regulation of pentose utilisation in Aspergillus niger reveals evolutionary adaptations in Eurotiales

(2011) E. Battaglia et al.   STUDIES IN MYCOLOGY

Genomic Analysis of the Necrotrophic Fungal Pathogens Sclerotinia sclerotiorum and Botrytis cinerea

(2011) Joelle Amselem et al.   PLoS Genetics

Podospora anserinaHemicellulases Potentiate theTrichoderma reeseiSecretome for Saccharification of Lignocellulosic Biomass

(2010) Marie Couturier et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Isolation and Identification of Two New Fungal Strains for Xylanase Production

(2010) Yasser Bakri et al.   APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY

Exploring laccase-like multicopper oxidase genes from the ascomycete Trichoderma reesei: a functional, phylogenetic and evolutionary study

(2010) Anthony Levasseur et al.   BMC BIOCHEMISTRY

Genes regulated by AoXlnR, the xylanolytic and cellulolytic transcriptional regulator, in Aspergillus oryzae

(2009) Yuji Noguchi et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Inducer-Dependent Nuclear Localization of a Zn(II)2Cys6Transcriptional Activator, AmyR, inAspergillus nidulans

(2009) Tomohiro MAKITA et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Assessment of the pectin degrading enzyme network of Aspergillus niger by functional genomics

(2009) Elena S. Martens-Uzunova et al.   FUNGAL GENETICS AND BIOLOGY

Post-genomic insights into the plant polysaccharide degradation potential of Aspergillus nidulans and comparison to Aspergillus niger and Aspergillus oryzae

(2009) Pedro M. Coutinho et al.   FUNGAL GENETICS AND BIOLOGY

Purification and properties of an endoglucanase ofAspergillus terreusDSM 826

(2009) Ali M. Elshafei et al.   JOURNAL OF BASIC MICROBIOLOGY

Regulation of transcription of cellulases- and hemicellulases-encoding genes in Aspergillus niger and Hypocrea jecorina (Trichoderma reesei)

(2008) Astrid R. Stricker et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

CreA mediates repression of the regulatory gene xlnR which controls the production of xylanolytic enzymes in Aspergillus nidulans

(2008) Elsy N. Tamayo et al.   FUNGAL GENETICS AND BIOLOGY

Production of xylanase by Aspergilli using alternative carbon sources: application of the crude extract on cellulose pulp biobleaching

(2008) Simone de Carvalho Peixoto-Nogueira et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

A Rapid Bootstrap Algorithm for the RAxML Web Servers

(2008) Alexandros Stamatakis et al.   SYSTEMATIC BIOLOGY

The genome sequence of the model ascomycete fungus Podospora anserina

(2008) Eric Espagne et al.   GENOME BIOLOGY