Genomic characterization of an emerging Enterobacteriaceae species: the first case of co-infection with a typical pathogen in a human patient
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Title
Genomic characterization of an emerging Enterobacteriaceae species: the first case of co-infection with a typical pathogen in a human patient
Authors
Keywords
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Journal
BMC GENOMICS
Volume 21, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2020-04-15
DOI
10.1186/s12864-020-6720-z
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- (2019) J. M. Hassell et al. Nature Communications
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- VFDB 2019: a comparative pathogenomic platform with an interactive web interface
- (2018) Bo Liu et al. NUCLEIC ACIDS RESEARCH
- GenBank
- (2018) Eric W Sayers et al. NUCLEIC ACIDS RESEARCH
- High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries
- (2018) Chirag Jain et al. Nature Communications
- Complete Genome Sequence of blaIMP–6-Positive Metakosakonia sp. MRY16-398 Isolate From the Ascites of a Diverticulitis Patient
- (2018) Tsuyoshi Sekizuka et al. Frontiers in Microbiology
- Pathogenomics of Virulence Traits of Plesiomonas shigelloides That Were Deemed Inconclusive by Traditional Experimental Approaches
- (2018) Temitope C. Ekundayo et al. Frontiers in Microbiology
- Phylogenomics and comparative genomic studies delineate six main clades within the family Enterobacteriaceae and support the reclassification of several polyphyletic members of the family
- (2017) Seema Alnajar et al. INFECTION GENETICS AND EVOLUTION
- IntaRNA 2.0: enhanced and customizable prediction of RNA–RNA interactions
- (2017) Martin Mann et al. NUCLEIC ACIDS RESEARCH
- GSA: Genome Sequence Archive *
- (2017) Yanqing Wang et al. GENOMICS PROTEOMICS & BIOINFORMATICS
- Nested Russian Doll-Like Genetic Mobility Drives Rapid Dissemination of the Carbapenem Resistance GeneblaKPC
- (2016) Anna E. Sheppard et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Skin microbiota is the main reservoir of Roseomonas mucosa , an emerging opportunistic pathogen so far assumed to be environmental
- (2016) S. Romano-Bertrand et al. CLINICAL MICROBIOLOGY AND INFECTION
- Genome-based phylogeny and taxonomy of the ‘Enterobacteriales’: proposal for Enterobacterales ord. nov. divided into the families Enterobacteriaceae, Erwiniaceae fam. nov., Pectobacteriaceae fam. nov., Yersiniaceae fam. nov., Hafniaceae fam. nov., Morganellaceae fam. nov., and Budviciaceae fam. nov.
- (2016) INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database
- (2016) Baofeng Jia et al. NUCLEIC ACIDS RESEARCH
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- (2016) Ivica Letunic et al. NUCLEIC ACIDS RESEARCH
- Antibiotic resistance in the wild: an eco-evolutionary perspective
- (2016) Teppo Hiltunen et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Antibiotic resistance in Enterobacteriaceae: mechanisms and clinical implications
- (2016) Jon Iredell et al. BMJ-British Medical Journal
- Antibiotic resistance in Enterobacteriaceae: mechanisms and clinical implications
- (2016) Jon Iredell et al. BMJ-British Medical Journal
- kSNP3.0: SNP detection and phylogenetic analysis of genomes without genome alignment or reference genome: Table 1
- (2015) Shea N Gardner et al. BIOINFORMATICS
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- (2015) Zhi Ruan et al. NUCLEIC ACIDS RESEARCH
- Antimicrobial resistance in humans, livestock and the wider environment
- (2015) M. Woolhouse et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- De novo assembly of bacterial transcriptomes from RNA-seq data
- (2015) Brian Tjaden GENOME BIOLOGY
- Heteroresistance at the Single-Cell Level: Adapting to Antibiotic Stress through a Population-Based Strategy and Growth-Controlled Interphenotypic Coordination
- (2014) X. Wang et al. mBio
- Cronobacter: an emerging opportunistic pathogen associated with neonatal meningitis, sepsis and necrotizing enterocolitis
- (2013) C J Hunter et al. Journal of Perinatology
- Computational analysis of bacterial RNA-Seq data
- (2013) Ryan McClure et al. NUCLEIC ACIDS RESEARCH
- Sources of Antimicrobial Resistance
- (2013) M. E. J. Woolhouse et al. SCIENCE
- Distinguishable Epidemics of Multidrug-Resistant Salmonella Typhimurium DT104 in Different Hosts
- (2013) A. E. Mather et al. SCIENCE
- Complete Genome Sequence of the Opportunistic Food-Borne Pathogen Cronobacter sakazakii ES15
- (2012) H. Shin et al. JOURNAL OF BACTERIOLOGY
- FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments
- (2010) Morgan N. Price et al. PLoS One
- BLAST+: architecture and applications
- (2009) Christiam Camacho et al. BMC BIOINFORMATICS
- Circos: An information aesthetic for comparative genomics
- (2009) M. Krzywinski et al. GENOME RESEARCH
- Secretome Analysis Uncovers an Hcp-Family Protein Secreted via a Type VI Secretion System in Agrobacterium tumefaciens
- (2008) H.-Y. Wu et al. JOURNAL OF BACTERIOLOGY
- NCBI BLAST: a better web interface
- (2008) M. Johnson et al. NUCLEIC ACIDS RESEARCH
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