Resequencing 200 Flax Cultivated Accessions Identifies Candidate Genes Related to Seed Size and Weight and Reveals Signatures of Artificial Selection

Genomic variations and association study of agronomic traits in flax

(2018) Dongwei Xie et al.   BMC GENOMICS

GW2 Functions as an E3 Ubiquitin Ligase for Rice Expansin-Like 1

(2018) Beom Choi et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Genome-Wide Association Studies of Image Traits Reveal Genetic Architecture of Drought Resistance in Rice

(2018) Zilong Guo et al.   Molecular Plant

Resequencing of 243 diploid cotton accessions based on an updated A genome identifies the genetic basis of key agronomic traits

(2018) Xiongming Du et al.   NATURE GENETICS

Chromosome-scale pseudomolecules refined by optical, physical and genetic maps in flax

(2018) Frank M. You et al.   PLANT JOURNAL

Genome-Wide Association Study Identifying Candidate Genes Influencing Important Agronomic Traits of Flax (Linum usitatissimum L.) Using SLAF-seq

(2018) Dongwei Xie et al.   Frontiers in Plant Science

Genome-Wide Association Study and Selection Signatures Detect Genomic Regions Associated with Seed Yield and Oil Quality in Flax

(2018) Frank You et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Genome-Wide Association Analysis of Mucilage and Hull Content in Flax (Linum usitatissimum L.) Seeds

(2018) Braulio Soto-Cerda et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

A PP2C-1 Allele Underlying a Quantitative Trait Locus Enhances Soybean 100-Seed Weight

(2017) Xiang Lu et al.   Molecular Plant

Tissue-Specific Ubiquitination by IPA1 INTERACTING PROTEIN1 Modulates IPA1 Protein Levels to Regulate Plant Architecture in Rice

(2017) Jing Wang et al.   PLANT CELL

Mutants in the imprintedPICKLE RELATED 2gene suppress seed abortion offertilization independent seedclass mutants and paternal excess interploidy crosses in Arabidopsis

(2017) Fang Huang et al.   PLANT JOURNAL

WIDE AND THICK GRAIN 1 , which encodes an otubain-like protease with deubiquitination activity, influences grain size and shape in rice

(2017) Ke Huang et al.   PLANT JOURNAL

Genome-wide identification and expression analysis of E2 ubiquitin-conjugating enzymes in tomato

(2017) Bhaskar Sharma et al.   Scientific Reports

Whole-Genome Analysis of Candidate genes Associated with Seed Size and Weight in Sorghum bicolor Reveals Signatures of Artificial Selection and Insights into Parallel Domestication in Cereal Crops

(2017) Yongfu Tao et al.   Frontiers in Plant Science

Quantitative Trait Locus Mapping for Verticillium wilt Resistance in an Upland Cotton Recombinant Inbred Line Using SNP-Based High Density Genetic Map

(2017) Koffi Kibalou Palanga et al.   Frontiers in Plant Science

Genetic diversity, population structure and association analysis in linseed (Linum usitatissimum L.)

(2017) Chandrawati et al.   PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS

Signaling pathways of seed size control in plants

(2016) Na Li et al.   CURRENT OPINION IN PLANT BIOLOGY

Arabidopsis ubiquitin-conjugating enzyme UBC22 is required for female gametophyte development and likely involved in Lys11-linked ubiquitination

(2016) Sheng Wang et al.   JOURNAL OF EXPERIMENTAL BOTANY

From association to prediction: statistical methods for the dissection and selection of complex traits in plants

(2015) Alexander E Lipka et al.   CURRENT OPINION IN PLANT BIOLOGY

Maternal control of seed size in plants

(2015) Na Li et al.   JOURNAL OF EXPERIMENTAL BOTANY

Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean

(2015) Zhengkui Zhou et al.   NATURE BIOTECHNOLOGY

Silage yield and quality traits in elite maize hybrids and their relationship to elemental concentrations in juvenile plants

(2015) Albrecht E. Melchinger et al.   PLANT BREEDING

The RING Finger Ubiquitin E3 Ligase SDIR1 Targets SDIR1-INTERACTING PROTEIN1 for Degradation to Modulate the Salt Stress Response and ABA Signaling inArabidopsis

(2015) Huawei Zhang et al.   PLANT CELL

QTL mapping of cucumber fruit flesh thickness by SLAF-seq

(2015) Xuewen Xu et al.   Scientific Reports

Insights into the Effects of Long-Term Artificial Selection on Seed Size in Maize

(2014) Candice N. Hirsch et al.   GENETICS

The Ubiquitin Receptor DA1 Regulates Seed and Organ Size by Modulating the Stability of the Ubiquitin-Specific Protease UBP15/SOD2 in Arabidopsis

(2014) L. Du et al.   PLANT CELL

The beginning of a seed: regulatory mechanisms of double fertilization

(2014) Andrea Bleckmann et al.   Frontiers in Plant Science

Ubiquitin-mediated control of seed size in plants

(2014) Na Li et al.   Frontiers in Plant Science

Genetic characterization of a core collection of flax (Linum usitatissimum L.) suitable for association mapping studies and evidence of divergent selection between fiber and linseed types

(2013) Braulio J Soto-Cerda et al.   BMC PLANT BIOLOGY

Genomic regions underlying agronomic traits in linseed (Linum usitatissimumL.) as revealed by association mapping

(2013) Braulio J. Soto-Cerda et al.   Journal of Integrative Plant Biology

Natural variation and artificial selection in four genes determine grain shape in rice

(2013) Li Lu et al.   NEW PHYTOLOGIST

The Ubiquitin Receptor DA1 Interacts with the E3 Ubiquitin Ligase DA2 to Regulate Seed and Organ Size in Arabidopsis

(2013) T. Xia et al.   PLANT CELL

Brassinosteroid Regulates Seed Size and Shape in Arabidopsis

(2013) W.-B. Jiang et al.   PLANT PHYSIOLOGY

Structure of a RING E3 ligase and ubiquitin-loaded E2 primed for catalysis

(2012) Anna Plechanovová et al.   NATURE

A map of rice genome variation reveals the origin of cultivated rice

(2012) Xuehui Huang et al.   NATURE

The genome of flax (Linum usitatissimum) assembledde novofrom short shotgun sequence reads

(2012) Zhiwen Wang et al.   PLANT JOURNAL

Genetic Diversity, Population Structure and Linkage Disequilibrium in Elite Chinese Winter Wheat Investigated with SSR Markers

(2012) Xiaojie Chen et al.   PLoS One

Integrated consensus genetic and physical maps of flax (Linum usitatissimum L.)

(2012) Sylvie Cloutier et al.   THEORETICAL AND APPLIED GENETICS

Genetic bases of rice grain shape: so many genes, so little known

(2012) Rongyu Huang et al.   TRENDS IN PLANT SCIENCE

Control of final organ size by Mediator complex subunit 25 in Arabidopsis thaliana

(2011) R. Xu et al.   DEVELOPMENT

Evaluating the effective numbers of independent tests and significant p-value thresholds in commercial genotyping arrays and public imputation reference datasets

(2011) Miao-Xin Li et al.   HUMAN GENETICS

SSR-based population structure, molecular diversity and linkage disequilibrium analysis of a collection of flax (Linum usitatissimum L.) varying for mucilage seed-coat content

(2011) Braulio J. Soto-Cerda et al.   MOLECULAR BREEDING

Whole-genome sequencing of multiple Arabidopsis thaliana populations

(2011) Jun Cao et al.   NATURE GENETICS

Artificial selection for a green revolution gene during japonica rice domestication

(2011) K. Asano et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genetic diversity of cultivated flax (Linum usitatissimum L.) germplasm assessed by retrotransposon-based markers

(2011) P. Smýkal et al.   THEORETICAL AND APPLIED GENETICS

Population genetics of genomics-based crop improvement methods

(2011) Martha T. Hamblin et al.   TRENDS IN GENETICS

GCTA: A Tool for Genome-wide Complex Trait Analysis

(2010) Jian Yang et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Fast and accurate long-read alignment with Burrows–Wheeler transform

(2010) Heng Li et al.   BIOINFORMATICS

Relationship, evolutionary fate and function of two maize co-orthologs of rice GW2 associated with kernel size and weight

(2010) Qing Li et al.   BMC PLANT BIOLOGY

Variance component model to account for sample structure in genome-wide association studies

(2010) Hyun Min Kang et al.   NATURE GENETICS

Genome-wide association studies of 14 agronomic traits in rice landraces

(2010) Xuehui Huang et al.   NATURE GENETICS

Identification and development of a functional marker of TaGW2 associated with grain weight in bread wheat (Triticum aestivum L.)

(2010) Zhenqi Su et al.   THEORETICAL AND APPLIED GENETICS

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Phylogenetic network of Linum species as revealed by non-coding chloroplast DNA sequences

(2009) Yong-Bi Fu et al.   GENETIC RESOURCES AND CROP EVOLUTION

Variability in stem fibre content and its association with other characteristics in 1177 flax (Linum usitatissimum L.) genebank accessions

(2009) Axel Diederichsen et al.   INDUSTRIAL CROPS AND PRODUCTS

The RPN5 Subunit of the 26s Proteasome Is Essential for Gametogenesis, Sporophyte Development, and Complex Assembly in Arabidopsis

(2009) A. J. Book et al.   PLANT CELL

Association Mapping: Critical Considerations Shift from Genotyping to Experimental Design

(2009) S. Myles et al.   PLANT CELL

Loss of 26S Proteasome Function Leads to Increased Cell Size and Decreased Cell Number in Arabidopsis Shoot Organs

(2009) J. Kurepa et al.   PLANT PHYSIOLOGY

Arabidopsis DREB2A-Interacting Proteins Function as RING E3 Ligases and Negatively Regulate Plant Drought Stress-Responsive Gene Expression

(2008) F. Qin et al.   PLANT CELL