Estimating effective population size using RADseq: Effects of SNP selection and sample size
Published 2020 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Estimating effective population size using RADseq: Effects of SNP selection and sample size
Authors
Keywords
-
Journal
Ecology and Evolution
Volume -, Issue -, Pages -
Publisher
Wiley
Online
2020-02-11
DOI
10.1002/ece3.6016
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Exploring the causes of small effective population sizes in cyst nematodes using artificial Globodera pallida populations
- (2019) Josselin Montarry et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Selecting RAD-Seq Data Analysis Parameters for Population Genetics: The More the Better?
- (2019) Natalia Díaz-Arce et al. Frontiers in Genetics
- Recent advances in conservation and population genomics data analysis
- (2018) S. Hendricks et al. Evolutionary Applications
- Linkage Disequilibrium Estimation in Low Coverage High-Throughput Sequencing Data
- (2018) Timothy P. Bilton et al. GENETICS
- Linkage Disequilibrium Estimation in Low Coverage High-Throughput Sequencing Data
- (2018) Timothy P. Bilton et al. GENETICS
- Estimating effective population size of large marine populations, is it feasible?
- (2018) Florianne Marandel et al. FISH AND FISHERIES
- Estimation of contemporary effective population size and population declines using RAD sequence data
- (2017) Schyler O. Nunziata et al. HEREDITY
- Estimating demographic contributions to effective population size in an age-structured wild population experiencing environmental and demographic stochasticity
- (2017) Amanda E. Trask et al. JOURNAL OF ANIMAL ECOLOGY
- Insights from genetic and demographic connectivity for the management of rays and skates
- (2017) Florianne Marandel et al. CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES
- A Bayesian state-space model to estimate population biomass with catch and limited survey data: application to the thornback ray (Raja clavata) in the Bay of Biscay
- (2016) Florianne Marandel et al. AQUATIC LIVING RESOURCES
- Estimating contemporary effective population size in non-model species using linkage disequilibrium across thousands of loci
- (2016) R K Waples et al. HEREDITY
- No loss of genetic diversity in the exploited and recently collapsed population of Bay of Biscay anchovy (Engraulis encrasicolus, L.)
- (2016) Iratxe Montes et al. MARINE BIOLOGY
- Population structure of Atlantic mackerel inferred from RAD-seq-derived SNP markers: effects of sequence clustering parameters and hierarchical SNP selection
- (2016) Naiara Rodríguez-Ezpeleta et al. Molecular Ecology Resources
- Assessing temporal genetic variation in a cougar population: influence of harvest and neighboring populations
- (2015) Rebeca L. Juarez et al. CONSERVATION GENETICS
- Comparative conservation genetics of protected endemic fishes in an arid-land riverscape
- (2015) Tyler J. Pilger et al. CONSERVATION GENETICS
- Evaluating methods for estimating local effective population size with and without migration
- (2015) Kimberly J. Gilbert et al. EVOLUTION
- Assessing spatial population structure and heterogeneity in the dronefly
- (2015) L. Francuski et al. JOURNAL OF ZOOLOGY
- Effects of Overlapping Generations on Linkage Disequilibrium Estimates of Effective Population Size
- (2014) Robin S. Waples et al. GENETICS
- Genetic estimation of evolutionary and contemporary effective population size in lake sturgeon (Acipenser fulvescensRafinesque, 1817) populations
- (2014) C. C. Wilson et al. JOURNAL OF APPLIED ICHTHYOLOGY
- Restriction site-associated DNA sequencing, genotyping error estimation andde novoassembly optimization for population genetic inference
- (2014) A. Mastretta-Yanes et al. Molecular Ecology Resources
- Stacks: an analysis tool set for population genomics
- (2013) Julian Catchen et al. MOLECULAR ECOLOGY
- NeEstimatorv2: re-implementation of software for the estimation of contemporary effective population size (Ne) from genetic data
- (2013) C. Do et al. Molecular Ecology Resources
- Linkage disequilibrium and effective population size when generations overlap
- (2012) John D. Robinson et al. Evolutionary Applications
- Community annotation and bioinformatics workforce development in concert--Little Skate Genome Annotation Workshops and Jamborees
- (2012) Q. Wang et al. Database-The Journal of Biological Databases and Curation
- RADSeq: next-generation population genetics
- (2011) J. W. Davey et al. Briefings in Functional Genomics
- Understanding and Estimating Effective Population Size for Practical Application in Marine Species Management
- (2011) MATTHEW P. HARE et al. CONSERVATION BIOLOGY
- CalculatingNeandNe/Nin age-structured populations: a hybrid Felsenstein-Hill approach
- (2011) Robin S. Waples et al. ECOLOGY
- Computing effective population size from molecular data: The case of three rare Spanish ruminant populations
- (2011) I. Cervantes et al. Livestock Science
- Estimation of census and effective population sizes: the increasing usefulness of DNA-based approaches
- (2010) Gordon Luikart et al. CONSERVATION GENETICS
- Estimating the ratio of effective to actual size of an age-structured population from individual demographic data
- (2010) S. Engen et al. JOURNAL OF EVOLUTIONARY BIOLOGY
- Reduced effective population size in an overexploited population of the Nile crocodile (Crocodylus niloticus)
- (2009) Jacqueline M. Bishop et al. BIOLOGICAL CONSERVATION
- Linkage disequilibrium estimates of contemporaryNeusing highly variable genetic markers: a largely untapped resource for applied conservation and evolution
- (2009) Robin S. Waples et al. Evolutionary Applications
- Cytological studies in Hypotremata and Pleurotremata (Pisces)
- (2009) AXEL NYGREN et al. HEREDITAS
- Temporal changes in allele frequencies but stable genetic diversity over the past 40 years in the Irish Sea population of thornback ray, Raja clavata
- (2008) M Chevolot et al. HEREDITY
- Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers
- (2008) Nathan A. Baird et al. PLoS One
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now