Newly emerged enterovirus-A71 C4 sublineage may be more virulent than B5 in the 2015–2016 hand-foot-and-mouth disease outbreak in northern Vietnam

Amino Acid Variation at VP1-145 of Enterovirus 71 Determines Attachment Receptor Usage and Neurovirulence in Human Scavenger Receptor B2 Transgenic Mice

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Environmental Surveillance Reveals Complex Enterovirus Circulation Patterns in Human Populations

(2018) Manasi Majumdar et al.   Open Forum Infectious Diseases

Evolution and Spatiotemporal Dynamics of Enterovirus A71 Subgenogroups in Vietnam

(2017) Nguyen Thi Thanh Thao et al.   JOURNAL OF INFECTIOUS DISEASES

A comparative study of multiple clinical enterovirus 71 isolates and evaluation of cross protection of inactivated vaccine strain FY-23 K-B in vitro

(2017) Ting Yang et al.   Virology Journal

Serotyping and Genetic Characterization of Hand, Foot, and Mouth Disease (HFMD)-Associated Enteroviruses of No-EV71 and Non-CVA16 Circulating in Fujian, China, 2011–2015

(2017) Yuwei Weng et al.   MEDICAL SCIENCE MONITOR

Persistent HIV-1 replication maintains the tissue reservoir during therapy

(2016) Ramon Lorenzo-Redondo et al.   NATURE

Genetic characterization of Enterovirus 71 strains circulating in Vietnam in 2012

(2016) Celeste Donato et al.   VIROLOGY

Characterization of Coxsackievirus A6- and Enterovirus 71-Associated Hand Foot and Mouth Disease in Beijing, China, from 2013 to 2015

(2016) Jie Li et al.   Frontiers in Microbiology

IVA: accuratede novoassembly of RNA virus genomes

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Phylodynamics of Enterovirus A71-Associated Hand, Foot, and Mouth Disease in Viet Nam

(2015) Jemma L. Geoghegan et al.   JOURNAL OF VIROLOGY

Genotypes of the Enterovirus Causing Hand Foot and Mouth Disease in Shanghai, China, 2012-2013

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Atypical hand, foot, and mouth disease associated with coxsackievirus A6 infection, Edinburgh, United Kingdom, January to February 2014

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Molecular Comparison and Evolutionary Analyses of VP1 Nucleotide Sequences of New African Human Enterovirus 71 Isolates Reveal a Wide Genetic Diversity

(2014) Maël Bessaud et al.   PLoS One

Phylogenetic Analysis of Enterovirus 71 Circulating in Beijing, China from 2007 to 2009

(2013) Junping Zhu et al.   PLoS One

Genetic and Antigenic Characterization of Enterovirus 71 in Ho Chi Minh City, Vietnam, 2011

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Transgenic mouse model for the study of enterovirus 71 neuropathogenesis

(2013) Ken Fujii et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genetic characterization of EV71 isolates from 2004 to 2010 reveals predominance and persistent circulation of the newly proposed genotype D and recent emergence of a distinct lineage of subgenotype C2 in Hong Kong

(2013) Cyril CY Yip et al.   Virology Journal

A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff

(2012) Pablo Cingolani et al.   FLY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

LoFreq: a sequence-quality aware, ultra-sensitive variant caller for uncovering cell-population heterogeneity from high-throughput sequencing datasets

(2012) Andreas Wilm et al.   NUCLEIC ACIDS RESEARCH

The Association of Recombination Events in the Founding and Emergence of Subgenogroup Evolutionary Lineages of Human Enterovirus 71

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Virology, epidemiology, pathogenesis, and control of enterovirus 71

(2010) Tom Solomon et al.   LANCET INFECTIOUS DISEASES

An emerging recombinant human enterovirus 71 responsible for the 2008 outbreak of Hand Foot and Mouth Disease in Fuyang city of China

(2010) Yan Zhang et al.   Virology Journal

Phylogenetic designation of enterovirus 71 genotypes and subgenotypes using complete genome sequences

(2009) Yoke-Fun Chan et al.   INFECTION GENETICS AND EVOLUTION

Reemergence of Enterovirus 71 in 2008 in Taiwan: Dynamics of Genetic and Antigenic Evolution from 1998 to 2008

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Epidemiology of Enterovirus 71 in The Netherlands, 1963 to 2008

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