Cellular deconvolution of GTEx tissues powers discovery of disease and cell-type associated regulatory variants

Cell-Type Heterogeneity in Adipose Tissue Is Associated with Complex Traits and Reveals Disease-Relevant Cell-Specific eQTLs

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Combined genetic and transcriptome analysis of patients with SLE: distinct, targetable signatures for susceptibility and severity

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A Bayesian framework for multiple trait colocalization from summary association statistics

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SFRP2/DPP4 and FMO1/LSP1 Define Major Fibroblast Populations in Human Skin

(2018) Tracy Tabib et al.   JOURNAL OF INVESTIGATIVE DERMATOLOGY

Integrating single-cell transcriptomic data across different conditions, technologies, and species

(2018) Andrew Butler et al.   NATURE BIOTECHNOLOGY

Shared genetic effects on chromatin and gene expression indicate a role for enhancer priming in immune response

(2018) Kaur Alasoo et al.   NATURE GENETICS

Profiling human breast epithelial cells using single cell RNA sequencing identifies cell diversity

(2018) Quy H. Nguyen et al.   Nature Communications

Single-cell transcriptomes from human kidneys reveal the cellular identity of renal tumors

(2018) Matthew D. Young et al.   SCIENCE

High-Dimensional Single-Cell Analysis Identifies Organ-Specific Signatures and Conserved NK Cell Subsets in Humans and Mice

(2018) Adeline Crinier et al.   IMMUNITY

Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris

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Gene expression variability across cells and species shapes innate immunity

(2018) Tzachi Hagai et al.   NATURE

Single cell RNA sequencing of human liver reveals distinct intrahepatic macrophage populations

(2018) Sonya A. MacParland et al.   Nature Communications

Transcriptional Programming of Normal and Inflamed Human Epidermis at Single-Cell Resolution

(2018) Jeffrey B. Cheng et al.   Cell Reports

Cancer Stem Cells in Squamous Cell Carcinoma

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Genetic effects on gene expression across human tissues

(2017) François Aguet et al.   NATURE

A FTH1 gene:pseudogene:microRNA network regulates tumorigenesis in prostate cancer

(2017) Jia Jia Chan et al.   NUCLEIC ACIDS RESEARCH

The Human Cell Atlas

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iPSCORE: A Resource of 222 iPSC Lines Enabling Functional Characterization of Genetic Variation across a Variety of Cell Types

(2017) Athanasia D. Panopoulos et al.   Stem Cell Reports

A Single-Cell Transcriptomic Map of the Human and Mouse Pancreas Reveals Inter- and Intra-cell Population Structure

(2016) Maayan Baron et al.   Cell Systems

The landscape of antisense gene expression in human cancers

(2015) O. Alejandro Balbin et al.   GENOME RESEARCH

RACK1 affects glioma cell growth and differentiation through the CNTN2-mediated RTK/Ras/MAPK pathway

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Robust enumeration of cell subsets from tissue expression profiles

(2015) Aaron M Newman et al.   NATURE METHODS

Cellular reprogramming in skin cancer

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Cell Specific eQTL Analysis without Sorting Cells

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Digital sorting of complex tissues for cell type-specific gene expression profiles

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Single-cell sequencing-based technologies will revolutionize whole-organism science

(2013) Ehud Shapiro et al.   NATURE REVIEWS GENETICS

Exome capture sequencing reveals new insights into hepatitis B virus-induced hepatocellular carcinoma at the early stage of tumorigenesis

(2013) YONG CHEN et al.   ONCOLOGY REPORTS

Examining the Impact of Skin LightenersIn Vitro

(2013) James V. Gruber et al.   Oxidative Medicine and Cellular Longevity

From keratinocyte to cancer: the pathogenesis and modeling of cutaneous squamous cell carcinoma

(2012) Vladimir Ratushny et al.   JOURNAL OF CLINICAL INVESTIGATION

Integration of DNA Copy Number Alterations and Transcriptional Expression Analysis in Human Gastric Cancer

(2012) Biao Fan et al.   PLoS One

DNA Mismatch Repair Gene Polymorphisms Affect Survival in Pancreatic Cancer

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Identifying the cellular origin of squamous skin tumors

(2011) G. Lapouge et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mapping identifiers for the integration of genomic datasets with the R/Bioconductor package biomaRt

(2009) Steffen Durinck et al.   Nature Protocols