Integrating a genome-wide association study with transcriptomic analysis to detect genes controlling grain drying rate in maize (Zea may, L.)

Integrating GWAS and gene expression data for functional characterization of resistance to white mould in soya bean

(2018) Zixiang Wen et al.   PLANT BIOTECHNOLOGY JOURNAL

Crop genome-wide association study: a harvest of biological relevance

(2018) Hai-Jun Liu et al.   PLANT JOURNAL

Genome-wide association study of field grain drying rate after physiological maturity based on a resequencing approach in elite maize germplasm

(2017) Liqiang Dai et al.   EUPHYTICA

Ror2 signaling regulates Golgi structure and transport through IFT20 for tumor invasiveness

(2017) Michiru Nishita et al.   Scientific Reports

Gene Networks and Chromatin and Transcriptional Regulation of the Phaseolin Promoter in Arabidopsis

(2013) S. Sundaram et al.   PLANT CELL

Genome-wide association study dissects the genetic architecture of oil biosynthesis in maize kernels

(2012) Hui Li et al.   NATURE GENETICS

Genome-wide association mapping of leaf metabolic profiles for dissecting complex traits in maize

(2012) C. Riedelsheimer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

GCTA: A Tool for Genome-wide Complex Trait Analysis

(2010) Jian Yang et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Trait dissection of maize kernel weight: Towards integrating hierarchical scales using a plant growth approach

(2010) Lucas Borrás et al.   FIELD CROPS RESEARCH

Characterization of a global germplasm collection and its potential utilization for analysis of complex quantitative traits in maize

(2010) Xiaohong Yang et al.   MOLECULAR BREEDING

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data

(2010) K. Wang et al.   NUCLEIC ACIDS RESEARCH

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Genetics of gene expression and its effect on disease

(2008) Valur Emilsson et al.   NATURE

The Nuclear Factor Y subunits NF-YB2 and NF-YB3 play additive roles in the promotion of flowering by inductive long-day photoperiods in Arabidopsis

(2008) Roderick W. Kumimoto et al.   PLANTA