A comprehensive phylogeny of flat bark beetles (Coleoptera: Cucujidae) with a revised classification and a new South American genus

Contribution to the knowledge of the genus Cucujus Fabricius (Coleoptera, Cucujidae) from China

(2019) MING-ZHI ZHAO et al.   ZOOTAXA

Mesopassandrinae subfam. nov., a basal group of parasitic flat beetle (Coleoptera: Passandridae) from Cretaceous Burmese amber

(2019) Mengjie Jin et al.   JOURNAL OF SYSTEMATIC PALAEONTOLOGY

Genome sequencing of Rhinorhipus Lawrence exposes an early branch of the Coleoptera

(2018) Dominik Kusy et al.   Frontiers in Zoology

Evolutionary history of Coleoptera revealed by extensive sampling of genes and species

(2018) Shao-Qian Zhang et al.   Nature Communications

ModelFinder: fast model selection for accurate phylogenetic estimates

(2017) Subha Kalyaanamoorthy et al.   NATURE METHODS

NOVOPlasty:de novoassembly of organelle genomes from whole genome data

(2016) Nicolas Dierckxsens et al.   NUCLEIC ACIDS RESEARCH

Terrace Aware Data Structure for Phylogenomic Inference from Supermatrices

(2016) Olga Chernomor et al.   SYSTEMATIC BIOLOGY

Rapid assembly of taxonomically validated mitochondrial genomes from historical insect collections

(2015) Martijn J. T. N. Timmermans et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

The Utility of Genome Skimming for Phylogenomic Analyses as Demonstrated for Glycerid Relationships (Annelida, Glyceridae)

(2015) Sandy Richter et al.   Genome Biology and Evolution

A molecular phylogenetic study of Cucujidae s.l. (Coleoptera: Cucujoidea)

(2015) THOMAS C. MCELRATH et al.   SYSTEMATIC ENTOMOLOGY

Phylogeny and classification of Cucujoidea and the recognition of a new superfamily Coccinelloidea (Coleoptera: Cucujiformia)

(2015) JAMES A. ROBERTSON et al.   SYSTEMATIC ENTOMOLOGY

The beetle tree of life reveals that Coleoptera survived end-Permian mass extinction to diversify during the Cretaceous terrestrial revolution

(2015) DUANE D. MCKENNA et al.   SYSTEMATIC ENTOMOLOGY

AliView: a fast and lightweight alignment viewer and editor for large datasets

(2014) Anders Larsson   BIOINFORMATICS

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Identification of Larvae of Endangered Cucujus cinnaberinus and C. haematodes (Coleoptera: Cucujidae)

(2014) Jerzy M. Gutowski et al.   JOURNAL OF INSECT SCIENCE

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

(2014) Lam-Tung Nguyen et al.   MOLECULAR BIOLOGY AND EVOLUTION

A revision of the Pediacus Shuckard 1839 (Coleoptera: Cucujidae) of Asia and Australasia

(2014) JOHN W. M. MARRIS et al.   ZOOTAXA

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

A Large-Scale, Higher-Level, Molecular Phylogenetic Study of the Insect Order Lepidoptera (Moths and Butterflies)

(2013) Jerome C. Regier et al.   PLoS One

Building the Coleoptera tree-of-life for >8000 species: composition of public DNA data and fit with Linnaean classification

(2013) LADISLAV BOCAK et al.   SYSTEMATIC ENTOMOLOGY

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

MITOS: Improved de novo metazoan mitochondrial genome annotation

(2012) Matthias Bernt et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Resolving Discrepancy between Nucleotides and Amino Acids in Deep-Level Arthropod Phylogenomics: Differentiating Serine Codons in 21-Amino-Acid Models

(2012) Andreas Zwick et al.   PLoS One

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Cucujus tulliae sp. n. – an endemic Mediterranean saproxylic beetle from genus Cucujus Fabricius, 1775 (Coleoptera, Cucujidae), and keys for identification of adults and larvae native to Europe

(2012) Teresa Bonacci et al.   ZooKeys

Phylogeny of the Coleoptera Based on Morphological Characters of Adults and Larvae

(2011) John F. Lawrence et al.   ANNALES ZOOLOGICI

Clarification of the Taxonomic Status ofCucujus clavipeswith Descriptions of the Larvae ofC. C. ClavipesandC. C. Puniceus(Coleoptera: Cucujidae)

(2011) Jongeun Lee et al.   FLORIDA ENTOMOLOGIST

TNT, a free program for phylogenetic analysis

(2008) Pablo A. Goloboff et al.   CLADISTICS