Sensory coding mechanisms revealed by optical tagging of physiologically defined neuronal types

Integrating single-cell transcriptomic data across different conditions, technologies, and species

(2018) Andrew Butler et al.   NATURE BIOTECHNOLOGY

Experience-Dependent Plasticity Drives Individual Differences in Pheromone-Sensing Neurons

(2016) Pei Sabrina Xu et al.   NEURON

Functional Overexpression of Vomeronasal Receptors Using a Herpes Simplex Virus Type 1 (HSV-1)-Derived Amplicon

(2016) Benjamin Stein et al.   PLoS One

ggtree: anrpackage for visualization and annotation of phylogenetic trees with their covariates and other associated data

(2016) Guangchuang Yu et al.   Methods in Ecology and Evolution

Integration of electrophysiological recordings with single-cell RNA-seq data identifies neuronal subtypes

(2015) János Fuzik et al.   NATURE BIOTECHNOLOGY

Electrophysiological, transcriptomic and morphologic profiling of single neurons using Patch-seq

(2015) Cathryn R Cadwell et al.   NATURE BIOTECHNOLOGY

Molecular profiling of activated olfactory neurons identifies odorant receptors for odors in vivo

(2015) Yue Jiang et al.   NATURE NEUROSCIENCE

Large-scale transcriptional profiling of chemosensory neurons identifies receptor-ligand pairs in vivo

(2015) Benoît von der Weid et al.   NATURE NEUROSCIENCE

Labeling of active neural circuits in vivo with designed calcium integrators

(2015) B. F. Fosque et al.   SCIENCE

Diversity and overlap of parvalbumin and somatostatin expressing interneurons in mouse presubiculum

(2015) Mérie Nassar et al.   Frontiers in Neural Circuits

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

The Olfactory Transcriptomes of Mice

(2014) Ximena Ibarra-Soria et al.   PLoS Genetics

Integrated action of pheromone signals in promoting courtship behavior in male mice

(2014) Sachiko Haga-Yamanaka et al.   eLife

Ultrasensitive fluorescent proteins for imaging neuronal activity

(2013) Tsai-Wen Chen et al.   NATURE

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

The E3 Ligase Mind Bomb-1 (Mib1) Modulates Delta-Notch Signaling to Control Neurogenesis and Gliogenesis in the Developing Spinal Cord

(2012) Kyungjoon Kang et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Organization of Vomeronasal Sensory Coding Revealed by Fast Volumetric Calcium Imaging

(2012) D. Turaga et al.   JOURNAL OF NEUROSCIENCE

Optimization of a GCaMP Calcium Indicator for Neural Activity Imaging

(2012) J. Akerboom et al.   JOURNAL OF NEUROSCIENCE

Single-neuron RNA-Seq: technical feasibility and reproducibility

(2012) Shenfeng Qiu et al.   Frontiers in Genetics

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

(2011) F. Sievers et al.   Molecular Systems Biology

Molecular organization of vomeronasal chemoreception

(2011) Yoh Isogai et al.   NATURE

Integrative genomics viewer

(2011) James T Robinson et al.   NATURE BIOTECHNOLOGY

A Recent Class of Chemosensory Neurons Developed in Mouse and Rat

(2011) Lucia Silvotti et al.   PLoS One

Developmental Origin of PreBotzinger Complex Respiratory Neurons

(2010) P. A. Gray et al.   JOURNAL OF NEUROSCIENCE

Regulation and function of immediate-early genes in the brain: Beyond neuronal activity markers

(2010) Hiroyuki Okuno   NEUROSCIENCE RESEARCH

Multielectrode Array Recordings of the Vomeronasal Epithelium

(2010) Hannah A. Arnson et al.   Jove-Journal of Visualized Experiments

Peak Multiphoton Excitation of mCherry Using an Optical Parametric Oscillator (OPO)

(2009) Tegy J. Vadakkan et al.   JOURNAL OF FLUORESCENCE

Photoactivatable mCherry for high-resolution two-color fluorescence microscopy

(2009) Fedor V Subach et al.   NATURE METHODS

Structural requirements for the activation of vomeronasal sensory neurons by MHC peptides

(2009) Trese Leinders-Zufall et al.   NATURE NEUROSCIENCE

Fast Three-Dimensional Fluorescence Imaging of Activity in Neural Populations by Objective-Coupled Planar Illumination Microscopy

(2008) Terrence F. Holekamp et al.   NEURON