Robust blind spectral unmixing for fluorescence microscopy using unsupervised learning

Texture Variation Adaptive Image Denoising With Nonlocal PCA

(2019) Wenzhao Zhao et al.   IEEE TRANSACTIONS ON IMAGE PROCESSING

Two-photon probes for in vivo multicolor microscopy of the structure and signals of brain cells

(2018) Clément Ricard et al.   Brain Structure & Function

Hyperspectral Unmixing Using a Neural Network Autoencoder

(2018) Burkni Palsson et al.   IEEE Access

An improved overlapping k-means clustering method for medical applications

(2017) Sina Khanmohammadi et al.   EXPERT SYSTEMS WITH APPLICATIONS

Synergistic Strategy for Multicolor Two-photon Microscopy: Application to the Analysis of Germinal Center Reactions In Vivo

(2017) Asylkhan Rakhymzhan et al.   Scientific Reports

A Novel Adaptive Possibilistic Clustering Algorithm

(2016) Spyridoula D. Xenaki et al.   IEEE TRANSACTIONS ON FUZZY SYSTEMS

Target/Background Classification Regularized Nonnegative Matrix Factorization for Fluorescence Unmixing

(2016) Binjie Qin et al.   IEEE TRANSACTIONS ON INSTRUMENTATION AND MEASUREMENT

Effects of Voluntary Locomotion and Calcitonin Gene-Related Peptide on the Dynamics of Single Dural Vessels in Awake Mice

(2016) Yu-Rong Gao et al.   JOURNAL OF NEUROSCIENCE

Multiplexed Spectral Imaging of 120 Different Fluorescent Labels

(2016) Alex M. Valm et al.   PLoS One

Mitochondrial Dynamics Tracking with Two-Photon Phosphorescent Terpyridyl Iridium(III) Complexes

(2016) Huaiyi Huang et al.   Scientific Reports

Two-hierarchical nonnegative matrix factorization distinguishing the fluorescent targets from autofluorescence for fluorescence imaging

(2015) Shaosen Huang et al.   Biomedical Engineering Online

Mechanical restriction of intracortical vessel dilation by brain tissue sculpts the hemodynamic response

(2015) Yu-Rong Gao et al.   NEUROIMAGE

MXS-Chaining: A Highly Efficient Cloning Platform for Imaging and Flow Cytometry Approaches in Mammalian Systems

(2015) Hanna L. Sladitschek et al.   PLoS One

Comparative study reveals better far-red fluorescent protein for whole body imaging

(2015) K.E. Luker et al.   Scientific Reports

Autofluorescence spectroscopy and imaging: a tool for biomedical research and diagnosis

(2014) A.C. Croce et al.   EUROPEAN JOURNAL OF HISTOCHEMISTRY

Signals and Sequences That Control CD28 Localization to the Central Region of the Immunological Synapse

(2014) M. Sanchez-Lockhart et al.   JOURNAL OF IMMUNOLOGY

Use of independent component analysis to improve signal-to-noise ratio in multi-probe fluorescence microscopy

(2014) L. DAO et al.   JOURNAL OF MICROSCOPY

Resolving fluorophores by unmixing multispectral fluorescence tomography with independent component analysis

(2014) Huangsheng Pu et al.   PHYSICS IN MEDICINE AND BIOLOGY

Six-color intravital two-photon imaging of brain tumors and their dynamic microenvironment

(2014) Clément Ricard et al.   Frontiers in Cellular Neuroscience

Efficient Blind Spectral Unmixing of Fluorescently Labeled Samples Using Multi-Layer Non-Negative Matrix Factorization

(2013) Thomas Pengo et al.   PLoS One

Separating structures of different fluorophore concentrations by principal component analysis on multispectral excitation-resolved fluorescence tomography images

(2013) Huangsheng Pu et al.   Biomedical Optics Express

Two-photon voltage imaging using a genetically encoded voltage indicator

(2013) Walther Akemann et al.   Scientific Reports

Total Variation Spatial Regularization for Sparse Hyperspectral Unmixing

(2012) Marian-Daniel Iordache et al.   IEEE TRANSACTIONS ON GEOSCIENCE AND REMOTE SENSING

Multicolor two-photon tissue imaging by wavelength mixing

(2012) Pierre Mahou et al.   NATURE METHODS

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

A practical guide to evaluating colocalization in biological microscopy

(2011) Kenneth W. Dunn et al.   AMERICAN JOURNAL OF PHYSIOLOGY-CELL PHYSIOLOGY

In Vivo Fluorescence Spectra Unmixing and Autofluorescence Removal by Sparse Nonnegative Matrix Factorization

(2011) Anne-Sophie Montcuquet et al.   IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING

Blind source unmixing in multi-spectral optoacoustic tomography

(2011) Jürgen Glatz et al.   OPTICS EXPRESS

Simultaneous multi-lifetime multi-color STED imaging for colocalization analyses

(2011) Johanna Bückers et al.   OPTICS EXPRESS

Cluster analysis of hyperspectral optical data for discriminating phytoplankton pigment assemblages in the open ocean

(2011) Elena Torrecilla et al.   REMOTE SENSING OF ENVIRONMENT

Characterisation and mapping of forest communities by clustering individual tree crowns

(2010) Peter Bunting et al.   REMOTE SENSING OF ENVIRONMENT

Blind Source Separation Techniques for the Decomposition of Multiply Labeled Fluorescence Images

(2009) Richard A. Neher et al.   BIOPHYSICAL JOURNAL

Absolute Two-Photon Absorption Spectra and Two-Photon Brightness of Orange and Red Fluorescent Proteins

(2009) M. Drobizhev et al.   JOURNAL OF PHYSICAL CHEMISTRY B