Single-Cell-Based Digital PCR Detection and Association of Shiga Toxin-Producing Escherichia coli Serogroups and Major Virulence Genes
Published 2020 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Single-Cell-Based Digital PCR Detection and Association of Shiga Toxin-Producing Escherichia coli Serogroups and Major Virulence Genes
Authors
Keywords
-
Journal
JOURNAL OF CLINICAL MICROBIOLOGY
Volume 58, Issue 3, Pages -
Publisher
American Society for Microbiology
Online
2020-01-03
DOI
10.1128/jcm.01684-19
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Prevalence and concentration of stx+ E. coli and E. coli O157 in bovine manure from Florida farms
- (2019) Christopher A. Baker et al. PLoS One
- A loop-mediated isothermal amplification method for rapid direct detection and differentiation of nonpathogenic and verocytotoxigenicEscherichia coliin beef and bovine faeces
- (2017) A.Ch. Stratakos et al. JOURNAL OF APPLIED MICROBIOLOGY
- Detection and Isolation of the “Top Seven” Shiga Toxin–Producing Escherichia coli in Ground Beef: Comparison of RapidFinder Kits to the U.S. Department of Agriculture Microbiology Laboratory Guidebook Method
- (2017) Pina M. Fratamico et al. JOURNAL OF FOOD PROTECTION
- Multiplex Quantitative PCR Assays for the Detection and Quantification of the Six Major Non-O157 Escherichia coli Serogroups in Cattle Feces
- (2016) P. B. SHRIDHAR et al. JOURNAL OF FOOD PROTECTION
- Comparison of Droplet Digital PCR and qPCR for the Quantification of Shiga Toxin-Producing Escherichia coli in Bovine Feces
- (2016) Bavo Verhaegen et al. Toxins
- Development of 11-Plex MOL-PCR Assay for the Rapid Screening of Samples for Shiga Toxin-Producing Escherichia coli
- (2016) Travis A. Woods et al. Frontiers in Cellular and Infection Microbiology
- DNA copy number concentration measured by digital and droplet digital quantitative PCR using certified reference materials
- (2015) Philippe Corbisier et al. ANALYTICAL AND BIOANALYTICAL CHEMISTRY
- A microfluidic droplet digital PCR for simultaneous detection of pathogenic Escherichia coli O157 and Listeria monocytogenes
- (2015) Xiaojun Bian et al. BIOSENSORS & BIOELECTRONICS
- A Four-Plex Real-Time PCR Assay, Based onrfbE,stx1,stx2, andeaeGenes, for the Detection and Quantification of Shiga Toxin–ProducingEscherichia coliO157 in Cattle Feces
- (2015) Lance W. Noll et al. Foodborne Pathogens and Disease
- Summer and Winter Prevalence of Shiga Toxin–ProducingEscherichia coli(STEC) O26, O45, O103, O111, O121, O145, and O157 in Feces of Feedlot Cattle
- (2015) Diana M.A. Dewsbury et al. Foodborne Pathogens and Disease
- A Comparison of Culture- and PCR-Based Methods to Detect Six Major Non-O157 Serogroups of Shiga Toxin-Producing Escherichia coli in Cattle Feces
- (2015) Lance W. Noll et al. PLoS One
- Detection of Cancer DNA in Plasma of Patients with Early-Stage Breast Cancer
- (2014) J. A. Beaver et al. CLINICAL CANCER RESEARCH
- Comparing Real-Time and Conventional PCR to Culture-Based Methods for Detecting and Quantifying Escherichia coli O157 in Cattle Feces
- (2014) M. E. JACOB et al. JOURNAL OF FOOD PROTECTION
- Evaluation of a Multiplex Real-Time PCR Method for Detecting Shiga Toxin–Producing Escherichia coli in Beef and Comparison to the U.S. Department of Agriculture Food Safety and Inspection ServiceMicrobiology Laboratory GuidebookMethod
- (2014) PINA M. FRATAMICO et al. JOURNAL OF FOOD PROTECTION
- High-throughput and sensitive next-generation droplet digital PCR assay for the quantitation of the hepatitis C virus mutation at core amino acid 70
- (2014) Motokazu Mukaide et al. JOURNAL OF VIROLOGICAL METHODS
- Prevalence of Shiga Toxin–Producing Escherichia coli and Associated Virulence Genes in Feces of Commercial Feedlot Cattle
- (2013) Natalia Cernicchiaro et al. Foodborne Pathogens and Disease
- Absolute quantification by droplet digital PCR versus analog real-time PCR
- (2013) Christopher M Hindson et al. NATURE METHODS
- Viral diagnostics in the era of digital polymerase chain reaction
- (2012) Ruth Hall Sedlak et al. DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE
- Applicability of a Multiplex PCR to Detect the Seven Major Shiga Toxin–Producing Escherichia coli Based on Genes That Code for Serogroup-Specific O-Antigens and Major Virulence Factors in Cattle Feces
- (2012) Jianfa Bai et al. Foodborne Pathogens and Disease
- Low-level detection and quantitation of cellular HIV-1 DNA and 2-LTR circles using droplet digital PCR
- (2012) Timothy J. Henrich et al. JOURNAL OF VIROLOGICAL METHODS
- Digital PCR hits its stride
- (2012) Monya Baker NATURE METHODS
- Comparison of microfluidic digital PCR and conventional quantitative PCR for measuring copy number variation
- (2012) Alexandra S. Whale et al. NUCLEIC ACIDS RESEARCH
- Evaluation of a Droplet Digital Polymerase Chain Reaction Format for DNA Copy Number Quantification
- (2011) Leonardo B. Pinheiro et al. ANALYTICAL CHEMISTRY
- Specificity of PCR and Serological Assays in the Detection of Escherichia coli Shiga Toxin Subtypes
- (2011) Peter C. H. Feng et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Detection by Multiplex Real-Time Polymerase Chain Reaction Assays and Isolation of Shiga Toxin–Producing Escherichia coli Serogroups O26, O45, O103, O111, O121, and O145 in Ground Beef
- (2011) Pina M. Fratamico et al. Foodborne Pathogens and Disease
- Evaluation of a Multiplex Real-Time Polymerase Chain Reaction for the Quantification of Escherichia coli O157 in Cattle Feces
- (2011) Megan E. Jacob et al. Foodborne Pathogens and Disease
- Megapixel digital PCR
- (2011) Kevin A Heyries et al. NATURE METHODS
- Applicability of a multiplex PCR to detect O26, O45, O103, O111, O121, O145, and O157 serogroups of Escherichia coli in cattle feces1
- (2011) Zachary Paddock et al. VETERINARY MICROBIOLOGY
- Escherichia coli O157:H7: Animal Reservoir and Sources of Human Infection
- (2010) Witold A. Ferens et al. Foodborne Pathogens and Disease
- A multiplex PCR procedure for the detection of six major virulence genes in Escherichia coli O157:H7
- (2010) Jianfa Bai et al. JOURNAL OF MICROBIOLOGICAL METHODS
- Evaluation of Five Methods for Total DNA Extraction from Western Corn Rootworm Beetles
- (2010) Hong Chen et al. PLoS One
- Microfluidic digital PCR enables rapid prenatal diagnosis of fetal aneuploidy
- (2009) H. Christina Fan et al. AMERICAN JOURNAL OF OBSTETRICS AND GYNECOLOGY
- High-throughput single nucleotide polymorphism genotyping using nanofluidic Dynamic Arrays
- (2009) Jun Wang et al. BMC GENOMICS
- Molecular mechanisms of Escherichia coli pathogenicity
- (2009) Matthew A. Croxen et al. NATURE REVIEWS MICROBIOLOGY
Become a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get StartedAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started