Whole genomic sequencing and sex-dependent abundance estimation of Cardinium sp., a common and hyperabundant bacterial endosymbiont of the American house dust mite, Dermatophagoides farinae

Host, Symbionts, and the Microbiome: The Missing Tripartite Interaction

(2019) Pina Brinker et al.   TRENDS IN MICROBIOLOGY

Correlation and causation between the microbiome, Wolbachia and host functional traits in natural populations of drosophilid flies

(2019) Caroline Fromont et al.   MOLECULAR ECOLOGY

Differential allergen expression in three Tyrophagus putrescentiae strains inhabited by distinct microbiome

(2019) Jan Hubert et al.   ALLERGY

Feeding Interactions Between Microorganisms and the House Dust Mites Dermatophagoides pteronyssinus and Dermatophagoides farinae (Astigmata: Pyroglyphidae)

(2019) Vit Molva et al.   JOURNAL OF MEDICAL ENTOMOLOGY

First Evidence of Intracellular Bacteria Cardinium in Thermophilic Mite Microzetorchestes emeryi (Acari: Oribatida): Molecular Screening of Bacterial Endosymbiont Species

(2019) Edyta Konecka et al.   CURRENT MICROBIOLOGY

Microbiome composition shapes rapid genomic adaptation of Drosophila melanogaster

(2019) Seth M. Rudman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Development of a multi-locus sequence typing system helps reveal the evolution of Cardinium hertigii, a reproductive manipulator symbiont of insects

(2019) Corinne M. Stouthamer et al.   BMC MICROBIOLOGY

Proteogenomics of the house dust mite, Dermatophagoides farinae: Allergen repertoire, accurate allergen identification, isoforms, and sex-biased proteome differences

(2019) Tomas Erban et al.   Journal of Proteomics

16S rRNA profiling of the Dermatophagoides farinae core microbiome: Enterococcus and Bartonella

(2018) J. Y. Kim et al.   CLINICAL AND EXPERIMENTAL ALLERGY

A massive incorporation of microbial genes into the genome of Tetranychus urticae , a polyphagous arthropod herbivore

(2018) N. Wybouw et al.   INSECT MOLECULAR BIOLOGY

The quest for bacterial allergens

(2018) Maria Nordengrün et al.   INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY

The Mite Tyrophagus putrescentiae Hosts Population-Specific Microbiomes That Respond Weakly to Starvation

(2018) Marta Nesvorna et al.   MICROBIAL ECOLOGY

Rewired RNAi-mediated genome surveillance in house dust mites

(2018) Mosharrof Mondal et al.   PLoS Genetics

Do the microorganisms from laboratory culture spent growth medium affect house dust mite fitness and microbiome composition?

(2018) Vit Molva et al.   Insect Science

Comparative microbiome analysis of Dermatophagoides farinae, Dermatophagoides pteronyssinus, and Tyrophagus putrescentiae

(2018) Jinyoung Lee et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

Population and Culture Age Influence the Microbiome Profiles of House Dust Mites

(2018) Jan Hubert et al.   MICROBIAL ECOLOGY

Comparative Genomics of Wolbachia–Cardinium Dual Endosymbiosis in a Plant-Parasitic Nematode

(2018) Amanda M. V. Brown et al.   Frontiers in Microbiology

Detailed two-dimensional gel proteomic mapping of the feces of the house dust mite Dermatophagoides pteronyssinus and comparison with D. farinae : Reduced trypsin protease content in D. pteronyssinus and different isoforms

(2017) Tomas Erban et al.   Journal of Proteomics

Comparison of Microbiomes between Red Poultry Mite Populations (Dermanyssus gallinae): Predominance of Bartonella-like Bacteria

(2017) Jan Hubert et al.   MICROBIAL ECOLOGY

Differences in the Bacterial Community of Laboratory and Wild Populations of the Predatory MiteCheyletus eruditus(Acarina: Cheyletidae) and Bacteria Transmission From Its PreyAcarus siro(Acari: Acaridae)

(2016) Jan Hubert et al.   JOURNAL OF ECONOMIC ENTOMOLOGY

Assessment of Bacterial Communities in Thirteen Species of Laboratory-Cultured Domestic Mites (Acari: Acaridida)

(2016) Jan Hubert et al.   JOURNAL OF ECONOMIC ENTOMOLOGY

Populations of Stored Product Mite Tyrophagus putrescentiae Differ in Their Bacterial Communities

(2016) Tomas Erban et al.   Frontiers in Microbiology

Feces Derived Allergens of Tyrophagus putrescentiae Reared on Dried Dog Food and Evidence of the Strong Nutritional Interaction between the Mite and Bacillus cereus Producing Protease Bacillolysins and Exo-chitinases

(2016) Tomas Erban et al.   Frontiers in Physiology

VSEARCH: a versatile open source tool for metagenomics

(2016) Torbjørn Rognes et al.   PeerJ

Bartonella quintana lipopolysaccharide (LPS): structure and characteristics of a potent TLR4 antagonist for in-vitro and in-vivo applications

(2016) Gosia Malgorzata-Miller et al.   Scientific Reports

The draft genome, transcriptome, and microbiome of Dermatophagoides farinae reveal a broad spectrum of dust mite allergens

(2015) Ting-Fung Chan et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

Allergen expression in the European house dust miteDermatophagoides pteronyssinusthroughout development and response to environmental conditions

(2015) J. C. VIDAL-QUIST et al.   MEDICAL AND VETERINARY ENTOMOLOGY

Signatures of host/symbiont genome coevolution in insect nutritional endosymbioses

(2015) Alex C. C. Wilson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Deconstructing the Polymerase Chain Reaction: Understanding and Correcting Bias Associated with Primer Degeneracies and Primer-Template Mismatches

(2015) Stefan J. Green et al.   PLoS One

Burn Injury Alters the Intestinal Microbiome and Increases Gut Permeability and Bacterial Translocation

(2015) Zachary M. Earley et al.   PLoS One

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Two-dimensional gel proteomic analysis of Dermatophagoides farinae feces

(2014) Tomas Erban et al.   EXPERIMENTAL AND APPLIED ACAROLOGY

The Effect of Antibiotics on Associated Bacterial Community of Stored Product Mites

(2014) Jan Kopecky et al.   PLoS One

Kraken: ultrafast metagenomic sequence classification using exact alignments

(2014) Derrick E Wood et al.   GENOME BIOLOGY

Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform

(2013) James J. Kozich et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Ribosomal Database Project: data and tools for high throughput rRNA analysis

(2013) James R. Cole et al.   NUCLEIC ACIDS RESEARCH

Varying Allergen Composition and Content Affects the in vivo Allergenic Activity of Commercial Dermatophagoides pteronyssinus Extracts

(2012) Anne Casset et al.   INTERNATIONAL ARCHIVES OF ALLERGY AND IMMUNOLOGY

Cardinium endosymbionts are widespread in synanthropic mite species (Acari: Astigmata)

(2012) Jan Kopecky et al.   JOURNAL OF INVERTEBRATE PATHOLOGY

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Comparative Genomics Suggests an Independent Origin of Cytoplasmic Incompatibility in Cardinium hertigii

(2012) Thomas Penz et al.   PLoS Genetics

Interactive metagenomic visualization in a Web browser

(2011) Brian D Ondov et al.   BMC BIOINFORMATICS

Allergens and their role in the allergic immune response

(2011) Thomas A. E. Platts-Mills et al.   IMMUNOLOGICAL REVIEWS

Wolbachia Enhance Drosophila Stem Cell Proliferation and Target the Germline Stem Cell Niche

(2011) E. M. Fast et al.   SCIENCE

The impact of endosymbionts on the evolution of host sex-determination mechanisms

(2011) Richard Cordaux et al.   TRENDS IN GENETICS

Distance-based multivariate analyses confound location and dispersion effects

(2011) David I. Warton et al.   Methods in Ecology and Evolution

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Prevalence of Cardinium Bacteria in Planthoppers and Spider Mites and Taxonomic Revision of "Candidatus Cardinium hertigii" Based on Detection of a New Cardinium Group from Biting Midges

(2009) Y. Nakamura et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Bacterial DNA Sequences Isolated from Standardized Dust Mite Extracts and Wild Mites

(2009) C. Valerio et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

Digestive function of lysozyme in synanthropic acaridid mites enables utilization of bacteria as a food source

(2008) Tomas Erban et al.   EXPERIMENTAL AND APPLIED ACAROLOGY

High incidence of the maternally inherited bacterium Cardinium in spiders

(2008) OLIVIER DURON et al.   MOLECULAR ECOLOGY