Single cell sequencing of radial glia progeny reveals the diversity of newborn neurons in the adult zebrafish brain

Electrophysiological Properties of Adult Zebrafish Oligodendrocyte Progenitor Cells

(2019) Vasiliki Tsata et al.   Frontiers in Cellular Neuroscience

Single-Cell Transcriptomics Analyses of Neural Stem Cell Heterogeneity and Contextual Plasticity in a Zebrafish Brain Model of Amyloid Toxicity

(2019) Mehmet Ilyas Cosacak et al.   Cell Reports

Stochastic cell-cycle entry and cell-state-dependent fate outputs of injury-reactivated tectal radial glia in zebrafish

(2019) Shuguang Yu et al.   eLife

Targeted knock-in of CreERT2 in zebrafish using CRISPR/Cas9

(2018) Gokul Kesavan et al.   CELL AND TISSUE RESEARCH

Single-Cell Transcriptomics Meets Lineage Tracing

(2018) Lennart Kester et al.   Cell Stem Cell

Whole-organism clone tracing using single-cell sequencing

(2018) Anna Alemany et al.   NATURE

Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

(2018) Bushra Raj et al.   NATURE BIOTECHNOLOGY

Simultaneous lineage tracing and cell-type identification using CRISPR–Cas9-induced genetic scars

(2018) Bastiaan Spanjaard et al.   NATURE BIOTECHNOLOGY

Conserved properties of dentate gyrus neurogenesis across postnatal development revealed by single-cell RNA sequencing

(2018) Hannah Hochgerner et al.   NATURE NEUROSCIENCE

Single-cell reconstruction of developmental trajectories during zebrafish embryogenesis

(2018) Jeffrey A. Farrell et al.   SCIENCE

The dynamics of gene expression in vertebrate embryogenesis at single-cell resolution

(2018) James A. Briggs et al.   SCIENCE

Single-cell mapping of gene expression landscapes and lineage in the zebrafish embryo

(2018) Daniel E. Wagner et al.   SCIENCE

Single-cell genomics to guide human stem cell and tissue engineering

(2018) J. Gray Camp et al.   NATURE METHODS

Single-cell analysis uncovers convergence of cell identities during axolotl limb regeneration

(2018) Tobias Gerber et al.   SCIENCE

Primary Spinal OPC Culture System from Adult Zebrafish to Study Oligodendrocyte Differentiation In Vitro

(2017) Volker Kroehne et al.   Frontiers in Cellular Neuroscience

CRISPR/Cas9-Mediated Zebrafish Knock-in as a Novel Strategy to Study Midbrain-Hindbrain Boundary Development

(2017) Gokul Kesavan et al.   Frontiers in Neuroanatomy

Neurogenesis and Gliogenesis in Nervous System Plasticity and Repair

(2016) Jonas Frisén   Annual Review of Cell and Developmental Biology

A comparative view of regenerative neurogenesis in vertebrates

(2016) Alessandro Alunni et al.   DEVELOPMENT

Afferent Connectivity of the Zebrafish Habenulae

(2016) Katherine J. Turner et al.   Frontiers in Neural Circuits

Adult Neurogenesis in Fish

(2016) Julia Ganz et al.   Cold Spring Harbor Perspectives in Biology

Adult axolotls can regenerate original neuronal diversity in response to brain injury

(2016) Ryoji Amamoto et al.   eLife

Diffusion maps for high-dimensional single-cell analysis of differentiation data

(2015) Laleh Haghverdi et al.   BIOINFORMATICS

Data-Driven Phenotypic Dissection of AML Reveals Progenitor-like Cells that Correlate with Prognosis

(2015) Jacob H. Levine et al.   CELL

Large-scale live imaging of adult neural stem cells in their endogenous niche

(2015) Nicolas Dray et al.   DEVELOPMENT

Live imaging of adult neural stem cell behavior in the intact and injured zebrafish brain

(2015) J. S. Barbosa et al.   SCIENCE

The Helix-Loop-Helix Protein Id1 Controls Stem Cell Proliferation During Regenerative Neurogenesis in the Adult Zebrafish Telencephalon

(2015) Rebecca Rodriguez Viales et al.   STEM CELLS

Adult Neurogenesis in Humans- Common and Unique Traits in Mammals

(2015) Aurélie Ernst et al.   PLOS BIOLOGY

Excitotoxic brain injury in adult zebrafish stimulates neurogenesis and long-distance neuronal integration

(2014) Kaia Skaggs et al.   GLIA

The age and genomic integrity of neurons after cortical stroke in humans

(2014) Hagen B Huttner et al.   NATURE NEUROSCIENCE

Full-length RNA-seq from single cells using Smart-seq2

(2014) Simone Picelli et al.   Nature Protocols

Regulation and Function of Adult Neurogenesis: From Genes to Cognition

(2014) James B. Aimone et al.   PHYSIOLOGICAL REVIEWS

Highly efficient CRISPR/Cas9-mediated knock-in in zebrafish by homology-independent DNA repair

(2013) T. O. Auer et al.   GENOME RESEARCH

Increased radial glia quiescence, decreased reactivation upon injury and unaltered neuroblast behavior underlie decreased neurogenesis in the aging zebrafish telencephalon

(2013) Kathrin Edelmann et al.   JOURNAL OF COMPARATIVE NEUROLOGY

viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia

(2013) El-ad David Amir et al.   NATURE BIOTECHNOLOGY

Cortical lesion stimulates adult subventricular zone neural progenitor cell proliferation and migration to the site of injury

(2013) Bhaskar Saha et al.   Stem Cell Research

A novel approach for resolving differences in single-cell gene expression patterns from zygote to blastocyst

(2012) F. Buettner et al.   BIOINFORMATICS

The BAF53a subunit of SWI/SNF-like BAF complexes is essential for hemopoietic stem cell function

(2012) V. Krasteva et al.   BLOOD

Comparative aspects of adult neural stem cell activity in vertebrates

(2012) Heiner Grandel et al.   DEVELOPMENT GENES AND EVOLUTION

Neurogranin Targets Calmodulin and Lowers the Threshold for the Induction of Long-Term Potentiation

(2012) Ling Zhong et al.   PLoS One

Time-Lapse Imaging of Neuroblastoma Cells to Determine Cell Fate upon Gene Knockdown

(2012) Richa Batra et al.   PLoS One

Multiobjective evolutionary algorithms to identify highly autocorrelated areas: the case of spatial distribution in financially compromised farms

(2011) Carlos R. García-Alonso et al.   ANNALS OF OPERATIONS RESEARCH

Clonal analysis by distinct viral vectors identifies bona fide neural stem cells in the adult zebrafish telencephalon and characterizes their division properties and fate

(2011) I. Rothenaigner et al.   DEVELOPMENT

Regeneration of the adult zebrafish brain from neurogenic radial glia-type progenitors

(2011) V. Kroehne et al.   DEVELOPMENT

Regenerative response following stab injury in the adult zebrafish telencephalon

(2011) Martin März et al.   DEVELOPMENTAL DYNAMICS

Stab wound injury of the zebrafish telencephalon: A model for comparative analysis of reactive gliosis

(2011) Emily Violette Baumgart et al.   GLIA

Subdivisions of the adult zebrafish subpallium by molecular marker analysis

(2011) Julia Ganz et al.   JOURNAL OF COMPARATIVE NEUROLOGY

Efficient regeneration by activation of neurogenesis in homeostatically quiescent regions of the adult vertebrate brain

(2010) D. A. Berg et al.   DEVELOPMENT

Expression of the transcription factor Olig2 in proliferating cells in the adult zebrafish telencephalon

(2010) Martin März et al.   DEVELOPMENTAL DYNAMICS

Evidence for neural stem cells in the medaka optic tectum proliferation zones

(2010) Alessandro Alunni et al.   Developmental Neurobiology

Heterogeneity in progenitor cell subtypes in the ventricular zone of the zebrafish adult telencephalon

(2010) Martin März et al.   GLIA

Heterogeneity and Fgf dependence of adult neural progenitors in the zebrafish telencephalon

(2010) Julia Ganz et al.   GLIA

The distribution ofGAD67-mRNA in the adult zebrafish (teleost) forebrain reveals a prosomeric pattern and suggests previously unidentified homologies to tetrapods

(2009) Thomas Mueller et al.   JOURNAL OF COMPARATIVE NEUROLOGY

19-P003 Proliferation and cell fates during regeneration of the adult zebrafish brain

(2009) Volker Kroehne et al.   MECHANISMS OF DEVELOPMENT

Connexin expression by radial glia-like cells is required for neurogenesis in the adult dentate gyrus

(2009) A. Kunze et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Motor Neuron Regeneration in Adult Zebrafish

(2008) M. M. Reimer et al.   JOURNAL OF NEUROSCIENCE

Fast unfolding of communities in large networks

(2008) Vincent D Blondel et al.   JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT

Proliferation, neurogenesis and regeneration in the non-mammalian vertebrate brain

(2007) J. Kaslin et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES