Untargeted metabolomics unravels functionalities of phosphorylation sites in Saccharomyces cerevisiae

CRISPR/Cas9: a molecular Swiss army knife for simultaneous introduction of multiple genetic modifications in Saccharomyces cerevisiae

(2015) Robert Mans et al.   FEMS YEAST RESEARCH

Acute Activation of Oxidative Pentose Phosphate Pathway as First-Line Response to Oxidative Stress in Human Skin Cells

(2015) Andreas Kuehne et al.   MOLECULAR CELL

Dynamic phosphoproteomics reveals TORC1-dependent regulation of yeast nucleotide and amino acid biosynthesis

(2015) A. P. Oliveira et al.   Science Signaling

A Cell-Signaling Network Temporally Resolves Specific versus Promiscuous Phosphorylation

(2015) Evgeny Kanshin et al.   Cell Reports

Dynamic phosphoproteomics reveals TORC1-dependent regulation of yeast nucleotide and amino acid biosynthesis

(2015) A. P. Oliveira et al.   Science Signaling

Large-scale functional analysis of the roles of phosphorylation in yeast metabolic pathways

(2014) J. C. Schulz et al.   Science Signaling

Turnover of protein phosphorylation evolving under stabilizing selection

(2014) Christian R. Landry et al.   Frontiers in Genetics

Evolution and functional cross-talk of protein post-translational modifications

(2013) Pedro Beltrao et al.   Molecular Systems Biology

Data, information, knowledge and principle: back to metabolism in KEGG

(2013) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Yeast Oligo-Mediated Genome Engineering (YOGE)

(2013) James E. DiCarlo et al.   ACS Synthetic Biology

Mass spectrometry-driven phosphoproteomics: patterning the systems biology mosaic

(2013) Martin A. Jünger et al.   Wiley Interdisciplinary Reviews-Developmental Biology

Systematic Functional Prioritization of Protein Posttranslational Modifications

(2012) Pedro Beltrao et al.   CELL

PP4 dephosphorylates Maf1 to couple multiple stress conditions to RNA polymerase III repression

(2012) Andrew J Oler et al.   EMBO JOURNAL

Response to Hyperosmotic Stress

(2012) H. Saito et al.   GENETICS

Regulation of Amino Acid, Nucleotide, and Phosphate Metabolism in Saccharomyces cerevisiae

(2012) P. O. Ljungdahl et al.   GENETICS

Evaluation and Properties of the Budding Yeast Phosphoproteome

(2012) Grigoris D. Amoutzias et al.   MOLECULAR & CELLULAR PROTEOMICS

Reciprocal Phosphorylation of Yeast Glycerol-3-Phosphate Dehydrogenases in Adaptation to Distinct Types of Stress

(2012) Y. J. Lee et al.   MOLECULAR AND CELLULAR BIOLOGY

Deciphering a global network of functionally associated post-translational modifications

(2012) Pablo Minguez et al.   Molecular Systems Biology

Regulation of yeast central metabolism by enzyme phosphorylation

(2012) Ana Paula Oliveira et al.   Molecular Systems Biology

Protein abundance is key to distinguish promiscuous from functional phosphorylation based on evolutionary information

(2012) E. D. Levy et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

High-Throughput, Accurate Mass Metabolome Profiling of Cellular Extracts by Flow Injection–Time-of-Flight Mass Spectrometry

(2011) Tobias Fuhrer et al.   ANALYTICAL CHEMISTRY

The importance of post-translational modifications in regulating Saccharomyces cerevisiae metabolism

(2011) Ana Paula Oliveira et al.   FEMS YEAST RESEARCH

Target of Rapamycin (TOR) in Nutrient Signaling and Growth Control

(2011) Robbie Loewith et al.   GENETICS

Saccharomyces Genome Database: the genomics resource of budding yeast

(2011) J. M. Cherry et al.   NUCLEIC ACIDS RESEARCH

Ultrahigh Performance Liquid Chromatography−Tandem Mass Spectrometry Method for Fast and Robust Quantification of Anionic and Aromatic Metabolites

(2010) Joerg Martin Buescher et al.   ANALYTICAL CHEMISTRY

Further developments towards a genome-scale metabolic model of yeast

(2010) Paul D Dobson et al.   BMC Systems Biology

Functional Overlap and Regulatory Links Shape Genetic Interactions between Signaling Pathways

(2010) Sake van Wageningen et al.   CELL

Decoding signalling networks by mass spectrometry-based proteomics

(2010) Chunaram Choudhary et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

The high-osmolarity glycerol (HOG) and cell wall integrity (CWI) signalling pathways interplay: a yeast dialogue between MAPK routes

(2010) Jose Manuel Rodríguez-Peña et al.   YEAST

Multisite protein phosphorylation - from molecular mechanisms to kinetic models

(2009) Carlos Salazar et al.   FEBS Journal

Mutation of a Phosphorylatable Residue in Put3p Affects the Magnitude of Rapamycin-inducedPUT1Activation in a Gat1p-dependent Manner

(2009) Michael K. Leverentz et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Normal Function of the Yeast TOR Pathway Requires the Type 2C Protein Phosphatase Ptc1

(2009) A. Gonzalez et al.   MOLECULAR AND CELLULAR BIOLOGY

Programming cells by multiplex genome engineering and accelerated evolution

(2009) Harris H. Wang et al.   NATURE

Dynamic Signaling in the Hog1 MAPK Pathway Relies on High Basal Signal Transduction

(2009) J. Macia et al.   Science Signaling

Weak functional constraints on phosphoproteomes

(2009) Christian R. Landry et al.   TRENDS IN GENETICS

Yap4 PKA- and GSK3-dependent phosphorylation affects its stability but not its nuclear localization

(2009) Jorge Pereira et al.   YEAST

Control of MAPK Specificity by Feedback Phosphorylation of Shared Adaptor Protein Ste50

(2008) Nan Hao et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The Sequential Activation of the Yeast HOG and SLT2 Pathways Is Required for Cell Survival to Cell Wall Stress

(2008) Clara Bermejo et al.   MOLECULAR BIOLOGY OF THE CELL

Caffeine extends yeast lifespan by targeting TORC1

(2008) Valeria Wanke et al.   MOLECULAR MICROBIOLOGY

PhosphoPep—a database of protein phosphorylation sites in model organisms

(2008) Bernd Bodenmiller et al.   NATURE BIOTECHNOLOGY

Yeast translational response to high salinity: Global analysis reveals regulation at multiple levels

(2008) D. Melamed et al.   RNA