Evidence for a novel overlapping coding sequence in POLG initiated at a CUG start codon

The EMBL-EBI search and sequence analysis tools APIs in 2019

(2019) Fábio Madeira et al.   NUCLEIC ACIDS RESEARCH

How to get away with nonsense: Mechanisms and consequences of escape from nonsense‐mediated RNA decay

(2019) Michael C. Dyle et al.   Wiley Interdisciplinary Reviews-RNA

Discovery of high-confidence human protein-coding genes and exons by whole-genome PhyloCSF helps elucidate 118 GWAS loci

(2019) Jonathan M. Mudge et al.   GENOME RESEARCH

eIF5B gates the transition from translation initiation to elongation

(2019) Jinfan Wang et al.   NATURE

Ensembl 2020

(2019) Andrew D Yates et al.   NUCLEIC ACIDS RESEARCH

Trips-Viz: a transcriptome browser for exploring Ribo-Seq data

(2018) Stephen J Kiniry et al.   NUCLEIC ACIDS RESEARCH

POLG-related disorders and their neurological manifestations

(2018) Shamima Rahman et al.   Nature Reviews Neurology

The UCSC Genome Browser database: 2019 update

(2018) Maximilian Haeussler et al.   NUCLEIC ACIDS RESEARCH

Non-AUG translation: a new start for protein synthesis in eukaryotes

(2017) Michael G. Kearse et al.   GENES & DEVELOPMENT

OpenMS – A platform for reproducible analysis of mass spectrometry data

(2017) Julianus Pfeuffer et al.   JOURNAL OF BIOTECHNOLOGY

The eukaryotic linear motif resource – 2018 update

(2017) Marc Gouw et al.   NUCLEIC ACIDS RESEARCH

OUP accepted manuscript

(2017)   NUCLEIC ACIDS RESEARCH

GWIPS-viz: 2018 update

(2017) Audrey M Michel et al.   NUCLEIC ACIDS RESEARCH

Maintenance and Expression of Mammalian Mitochondrial DNA

(2016) Claes M. Gustafsson et al.   Annual Review of Biochemistry

Flexible Data Analysis Pipeline for High-Confidence Proteogenomics

(2016) Hendrik Weisser et al.   JOURNAL OF PROTEOME RESEARCH

Insights into the mechanisms of eukaryotic translation gained with ribosome profiling

(2016) Dmitry E. Andreev et al.   NUCLEIC ACIDS RESEARCH

Improving GENCODE reference gene annotation using a high-stringency proteogenomics workflow

(2016) James C. Wright et al.   Nature Communications

2016 update of the PRIDE database and its related tools

(2015) Juan Antonio Vizcaíno et al.   NUCLEIC ACIDS RESEARCH

GWIPS-viz as a tool for exploring ribosome profiling evidence supporting the synthesis of alternative proteoforms

(2015) Audrey M. Michel et al.   PROTEOMICS

The Scanning Mechanism of Eukaryotic Translation Initiation

(2014) Alan G. Hinnebusch   Annual Review of Biochemistry

Mitochondrial genome maintenance in health and disease

(2014) William C. Copeland et al.   DNA REPAIR

A draft map of the human proteome

(2014) Min-Sik Kim et al.   NATURE

Mapping overlapping functional elements embedded within the protein-coding regions of RNA viruses

(2014) Andrew E. Firth   NUCLEIC ACIDS RESEARCH

GWIPS-viz: development of a ribo-seq genome browser

(2013) Audrey M. Michel et al.   NUCLEIC ACIDS RESEARCH

POLGmutations in Australian patients with mitochondrial disease

(2012) P. Woodbridge et al.   INTERNAL MEDICINE JOURNAL

Tankyrase-targeted therapeutics: expanding opportunities in the PARP family

(2012) Jenna L. Riffell et al.   NATURE REVIEWS DRUG DISCOVERY

PhyloCSF: a comparative genomics method to distinguish protein coding and non-coding regions

(2011) M. F. Lin et al.   BIOINFORMATICS

Ribosome Profiling of Mouse Embryonic Stem Cells Reveals the Complexity and Dynamics of Mammalian Proteomes

(2011) Nicholas T. Ingolia et al.   CELL

Evidence of abundant stop codon readthrough in Drosophila and other metazoa

(2011) I. Jungreis et al.   GENOME RESEARCH

An upstream ORF with non-AUG start codon is translated in vivo but dispensable for translational control of GCN4 mRNA

(2011) F. Zhang et al.   NUCLEIC ACIDS RESEARCH

Identification of evolutionarily conserved non-AUG-initiated N-terminal extensions in human coding sequences

(2011) Ivaylo P. Ivanov et al.   NUCLEIC ACIDS RESEARCH

The mechanism of eukaryotic translation initiation and principles of its regulation

(2010) Richard J. Jackson et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Large-scale analysis of exonized mammalian-wide interspersed repeats in primate genomes

(2009) Lan Lin et al.   HUMAN MOLECULAR GENETICS

SeaView Version 4: A Multiplatform Graphical User Interface for Sequence Alignment and Phylogenetic Tree Building

(2009) M. Gouy et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genome-Wide Analysis in Vivo of Translation with Nucleotide Resolution Using Ribosome Profiling

(2009) N. T. Ingolia et al.   SCIENCE

RNAalifold: improved consensus structure prediction for RNA alignments

(2008) Stephan H Bernhart et al.   BMC BIOINFORMATICS