Commensalism outweighs phylogeographical structure in its effect on phenotype of a Sudanian savanna rodent

ape 5.0: an environment for modern phylogenetics and evolutionary analyses in R

(2018) Emmanuel Paradis et al.   BIOINFORMATICS

Phylogeography of a widespread sub-Saharan murid rodent Aethomys chrysophilus: the role of geographic barriers and paleoclimate in the Zambezian bioregion

(2018) Vladimír Mazoch et al.   MAMMALIA

Fossils know it best: using a new set of fossil calibrations to improve the temporal phylogenetic framework of murid rodents (Rodentia: Muridae)

(2018) Tatiana Aghová et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The effect of rainfall on population dynamics in Sahara-Sahel rodents

(2018) Margarida Isabel Barros et al.   Mammal Research

A longitudinal study of phenotypic changes in early domestication of house mice

(2018) Madeleine Geiger et al.   Royal Society Open Science

Back to the wild: does feralization affect the mandible of non-commensal house mice (Mus musculus domesticus)?

(2018) Louise Souquet et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Phylogenetic position of a monotypic Ethiopian endemic rodent genus Megadendromus (Rodentia, Nesomyidae)

(2017) Leonid A. Lavrenchenko et al.   MAMMALIA

When Viruses Don’t Go Viral: The Importance of Host Phylogeographic Structure in the Spatial Spread of Arenaviruses

(2017) Sophie Gryseels et al.   PLoS Pathogens

Facial shape differences between rats selected for tame and aggressive behaviors

(2017) Nandini Singh et al.   PLoS One

Repeated evolution of camouflage in speciose desert rodents

(2017) Zbyszek Boratyński et al.   Scientific Reports

Algorithmic improvements to species delimitation and phylogeny estimation under the multispecies coalescent

(2016) Graham Jones   JOURNAL OF MATHEMATICAL BIOLOGY

Drivers of ecosystem and climate change in tropical West Africa over the past ∼540 000 years

(2016) Charlotte S. Miller et al.   JOURNAL OF QUATERNARY SCIENCE

Variation in the Coat-Color-Controlling Genes,Mc1randAsip, in the House MouseMus musculusfrom Madagascar

(2016) Yuki Sakuma et al.   MAMMAL STUDY

Reticulation, divergence, and the phylogeography–phylogenetics continuum

(2016) Scott V. Edwards et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An Ecological and Evolutionary Framework for Commensalism in Anthropogenic Environments

(2016) Ardern Hulme-Beaman et al.   TRENDS IN ECOLOGY & EVOLUTION

The impact of ancestral population size and incomplete lineage sorting on Bayesian estimation of species divergence times

(2015) Konstantinos Angelis et al.   Current Zoology

The impact of ancestral population size and incomplete lineage sorting on Bayesian estimation of species divergence times

(2015) Konstantinos Angelis et al.   Current Zoology

DISSECT: an assignment-free Bayesian discovery method for species delimitation under the multispecies coalescent

(2014) Graham Jones et al.   BIOINFORMATICS

Pliocene environmental change in West Africa and the onset of strong NE trade winds (ODP Sites 659 and 658)

(2014) Francesca Vallé et al.   PALAEOGEOGRAPHY PALAEOCLIMATOLOGY PALAEOECOLOGY

Large Spatial Scale of the Phenotype-Environment Color Matching in Two Cryptic Species of African Desert Jerboas (Dipodidae: Jaculus)

(2014) Zbyszek Boratyński et al.   PLoS One

BEAST 2: A Software Platform for Bayesian Evolutionary Analysis

(2014) Remco Bouckaert et al.   PLoS Computational Biology

New Status for Two African Giant Forest Shrews,Crocidura goliath goliathandC. goliath nimbasilvanus(Mammalia: Soricomorpha), Based on Molecular and Geometic Morphometric Analyses

(2013) F. Jacquet et al.   AFRICAN ZOOLOGY

A mitochondrial phylogeographic scenario for the most widespread African rodent,Mastomys natalensis

(2013) Paolo Colangelo et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Uncovering cryptic diversity and refugial persistence among small mammal lineages across the Eastern Afromontane biodiversity hotspot

(2013) Terrence C. Demos et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Mitochondrial and Nuclear Genes-Based Phylogeography of Arvicanthis niloticus (Murinae) and Sub-Saharan Open Habitats Pleistocene History

(2013) Gauthier Dobigny et al.   PLoS One

Goldilocks Meets Santa Rosalia: An Ephemeral Speciation Model Explains Patterns of Diversification Across Time Scales

(2012) Erica Bree Rosenblum et al.   Evolutionary Biology

Assessment of Three Mitochondrial Genes (16S, Cytb, CO1) for Identifying Species in the Praomyini Tribe (Rodentia: Muridae)

(2012) Violaine Nicolas et al.   PLoS One

Next-Generation Sequencing for Rodent Barcoding: Species Identification from Fresh, Degraded and Environmental Samples

(2012) Maxime Galan et al.   PLoS One

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Systematics and diversification of Praomys species (Rodentia: Muridae) endemic to the Cameroon Volcanic Line (West Central Africa)

(2012) Alain D. Missoup et al.   ZOOLOGICA SCRIPTA

Endemic Foci of the Tick-Borne Relapsing Fever Spirochete Borrelia crocidurae in Mali, West Africa, and the Potential for Human Infection

(2012) Tom G. Schwan et al.   PLoS Neglected Tropical Diseases

Linear Discrimination, Ordination, and the Visualization of Selection Gradients in Modern Morphometrics

(2011) Philipp Mitteroecker et al.   Evolutionary Biology

Orbital scale vegetation change in Africa

(2011) Lydie Dupont   QUATERNARY SCIENCE REVIEWS

Performance, Accuracy, and Web Server for Evolutionary Placement of Short Sequence Reads under Maximum Likelihood

(2011) Simon A. Berger et al.   SYSTEMATIC BIOLOGY

phytools: an R package for phylogenetic comparative biology (and other things)

(2011) Liam J. Revell   Methods in Ecology and Evolution

DensiTree: making sense of sets of phylogenetic trees

(2010) R. R. Bouckaert   BIOINFORMATICS

phangorn: phylogenetic analysis in R

(2010) Klaus Peter Schliep   BIOINFORMATICS

EVOLUTIONARY CONSTRAINT AND ECOLOGICAL CONSEQUENCES

(2010) Douglas J. Futuyma   EVOLUTION

Cenozoic vegetation, climate changes and hominid evolution in tropical Africa

(2010) Raymonde Bonnefille   GLOBAL AND PLANETARY CHANGE

A spatio-temporal decrease in molar size in the western European house mouse

(2010) Jacques Cassaing et al.   MAMMALIAN BIOLOGY

Plio-Pleistocene history of West African Sudanian savanna and the phylogeography of the Praomys daltoni complex (Rodentia): the environment/geography/genetic interplay

(2010) J. BRYJA et al.   MOLECULAR ECOLOGY

Improving Marginal Likelihood Estimation for Bayesian Phylogenetic Model Selection

(2010) Wangang Xie et al.   SYSTEMATIC BIOLOGY

Molecular and morphometric variation in two sibling species of the genus Praomys (Rodentia: Muridae): implications for biogeography

(2010) VIOLAINE NICOLAS et al.   ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Animal evolution during domestication: the domesticated fox as a model

(2009) Lyudmila Trut et al.   BIOESSAYS

Phylogeography of the Guinea multimammate mouse (Mastomys erythroleucus): a case study for Sahelian species in West Africa

(2009) Carine Brouat et al.   JOURNAL OF BIOGEOGRAPHY

Gene tree discordance, phylogenetic inference and the multispecies coalescent

(2009) James H. Degnan et al.   TRENDS IN ECOLOGY & EVOLUTION

Island selection on mammalian life-histories: genetic differentiation in offspring size

(2008) Tapio Mappes et al.   BMC EVOLUTIONARY BIOLOGY

Phylogeographic structure and regional history ofLemniscomys striatus(Rodentia: Muridae) in tropical Africa

(2008) Violaine Nicolas et al.   JOURNAL OF BIOGEOGRAPHY

The effects of sex, age and commensal way of life on levels of fecal glucocorticoid metabolites in spiny mice (Acomys cahirinus)

(2008) M. Nováková et al.   PHYSIOLOGY & BEHAVIOR