RsmW, Pseudomonas aeruginosa small non-coding RsmA-binding RNA upregulated in biofilm versus planktonic growth conditions

Regulation of Bacterial Virulence by Csr (Rsm) Systems

(2015) Christopher A. Vakulskas et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Structural basis of the non-coding RNA RsmZ acting as a protein sponge

(2014) Olivier Duss et al.   NATURE

A sequence-based approach for prediction of CsrA/RsmA targets in bacteria with experimental validation in Pseudomonas aeruginosa

(2014) P. R. Kulkarni et al.   NUCLEIC ACIDS RESEARCH

A direct link between the global regulator PhoP and the Csr regulon inY. pseudotuberculosisthrough the small regulatory RNA CsrC

(2014) Aaron M Nuss et al.   RNA Biology

NrsZ: a novel, processed, nitrogen-dependent, small non-coding RNA that regulatesPseudomonas aeruginosa PAO1 virulence

(2013) Nicolas Wenner et al.   ENVIRONMENTAL MICROBIOLOGY

Contributions of Environmental Signals and Conserved Residues to the Functions of Carbon Storage Regulator A of Borrelia burgdorferi

(2013) S. L. Rajasekhar Karna et al.   INFECTION AND IMMUNITY

An unusual CsrA family member operates in series with RsmA to amplify posttranscriptional responses in Pseudomonas aeruginosa

(2013) J. N. Marden et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structural Rearrangement in an RsmA/CsrA Ortholog of Pseudomonas aeruginosa Creates a Dimeric RNA-Binding Protein, RsmN

(2013) Elizabeth R. Morris et al.   STRUCTURE

An atlas of Hfq-bound transcripts reveals 3′ UTRs as a genomic reservoir of regulatory small RNAs

(2012) Yanjie Chao et al.   EMBO JOURNAL

Genome-wide identification of novel small RNAs in Pseudomonas aeruginosa

(2012) María Gómez-Lozano et al.   ENVIRONMENTAL MICROBIOLOGY

Comparative Profiling of Pseudomonas aeruginosa Strains Reveals Differential Expression of Novel Unique and Conserved Small RNAs

(2012) Silvia Ferrara et al.   PLoS One

Small regulatory RNAs inPseudomonas aeruginosa

(2012) Elisabeth Sonnleitner et al.   RNA Biology

The Single-Nucleotide Resolution Transcriptome of Pseudomonas aeruginosa Grown in Body Temperature

(2012) Omri Wurtzel et al.   PLoS Pathogens

Small RNAs as regulators of primary and secondary metabolism in Pseudomonas species

(2011) Elisabeth Sonnleitner et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

The Pseudomonas aeruginosa sensor RetS switches Type III and Type VI secretion via c-di-GMP signalling

(2011) Joana A. Moscoso et al.   ENVIRONMENTAL MICROBIOLOGY

Circuitry linking the Csr and stringent response global regulatory systems

(2011) Adrianne N. Edwards et al.   MOLECULAR MICROBIOLOGY

Construction of anrsmXco-variance model and identification of fiversmXnon-coding RNAs inPseudomonas syringae pv. tomatoDC3000

(2011) Simon Moll et al.   RNA Biology

GacA-Controlled Activation of Promoters for Small RNA Genes in Pseudomonas fluorescens

(2010) B. Humair et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Post-transcriptional global regulation by CsrA in bacteria

(2010) Johan Timmermans et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

The Novel Two-Component Regulatory System BfiSR Regulates Biofilm Development by Controlling the Small RNA rsmZ through CafA

(2010) O. E. Petrova et al.   JOURNAL OF BACTERIOLOGY

Regulatory RNAs and the HptB/RetS signalling pathways fine-tune Pseudomonas aeruginosa pathogenesis

(2010) Christophe Bordi et al.   MOLECULAR MICROBIOLOGY

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Temperature-Dependent Expression of phzM and Its Regulatory Genes lasI and ptsP in Rhizosphere Isolate Pseudomonas sp. Strain M18

(2009) J. Huang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

JBrowse: A next-generation genome browser

(2009) M. E. Skinner et al.   GENOME RESEARCH

Temperature-responsive sensing regulates biocontrol factor expression in Pseudomonas fluorescens CHA0

(2009) Bérénice Humair et al.   ISME Journal

Small RNA-dependent Expression of Secondary Metabolism Is Controlled by Krebs Cycle Function inPseudomonas fluorescens

(2009) Kasumi Takeuchi et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Revisiting the quorum-sensing hierarchy in Pseudomonas aeruginosa: the transcriptional regulator RhlR regulates LasR-specific factors

(2009) V. Dekimpe et al.   MICROBIOLOGY-SGM

The long-chain fatty acid sensor, PsrA, modulates the expression ofrpoSand the type III secretionexsCEBAoperon inPseudomonas aeruginosa

(2009) Yun Kang et al.   MOLECULAR MICROBIOLOGY

The GacS/GacA signal transduction system ofPseudomonas aeruginosaacts exclusively through its control over the transcription of the RsmY and RsmZ regulatory small RNAs

(2009) Anja Brencic et al.   MOLECULAR MICROBIOLOGY

Determination of the regulon and identification of novel mRNA targets ofPseudomonas aeruginosaRsmA

(2009) Anja Brencic et al.   MOLECULAR MICROBIOLOGY

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Characterization of the Histidine-containing Phosphotransfer Protein B-mediated Multistep Phosphorelay System inPseudomonas aeruginosaPAO1

(2008) Jye-Lin Hsu et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

A Csr-type regulatory system, including small non-coding RNAs, regulates the global virulence regulator RovA of Yersinia pseudotuberculosis through RovM

(2008) Ann Kathrin Heroven et al.   MOLECULAR MICROBIOLOGY