Removal of unwanted variation reveals novel patterns of gene expression linked to sleep homeostasis in murine cortex

Separating the Contribution of Glucocorticoids and Wakefulness to the Molecular and Electrophysiological Correlates of Sleep Homeostasis

(2017) Valérie Mongrain et al.   SLEEP

The truncated TrkB receptor influences mammalian sleep

(2015) Adam J. Watson et al.   AMERICAN JOURNAL OF PHYSIOLOGY-REGULATORY INTEGRATIVE AND COMPARATIVE PHYSIOLOGY

Effects of sleep and wake on astrocytes: clues from molecular and ultrastructural studies

(2015) Michele Bellesi et al.   BMC BIOLOGY

Memory acquisition and retrieval impact different epigenetic processes that regulate gene expression

(2015) Lucia L Peixoto et al.   BMC GENOMICS

How data analysis affects power, reproducibility and biological insight of RNA-seq studies in complex datasets

(2015) Lucia Peixoto et al.   NUCLEIC ACIDS RESEARCH

Normalization of RNA-seq data using factor analysis of control genes or samples

(2014) Davide Risso et al.   NATURE BIOTECHNOLOGY

Effects of Sleep and Wake on Oligodendrocytes and Their Precursors

(2013) M. Bellesi et al.   JOURNAL OF NEUROSCIENCE

NEAT1 long noncoding RNA regulates transcription via protein sequestration within subnuclear bodies

(2013) Tetsuro Hirose et al.   MOLECULAR BIOLOGY OF THE CELL

Neuroligin-1 links neuronal activity to sleep-wake regulation

(2013) J. El Helou et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Paraspeckle nuclear bodies—useful uselessness?

(2012) Shinichi Nakagawa et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Genomic analysis of sleep deprivation reveals translational regulation in the hippocampus

(2012) Christopher G. Vecsey et al.   PHYSIOLOGICAL GENOMICS

Role of Homer Proteins in the Maintenance of Sleep-Wake States

(2012) Nirinjini Naidoo et al.   PLoS One

Using control genes to correct for unwanted variation in microarray data

(2011) J. A. Gagnon-Bartsch et al.   BIOSTATISTICS

Sleep Loss Reduces the DNA-Binding of BMAL1, CLOCK, and NPAS2 to Specific Clock Genes in the Mouse Cerebral Cortex

(2011) Valérie Mongrain et al.   PLoS One

Computational analysis of gene regulation in animal sleep deprivation

(2010) Haifang Wang et al.   PHYSIOLOGICAL GENOMICS

Molecular and anatomical signatures of sleep deprivation in the mouse brain

(2010) Carol L. Thompson   Frontiers in Neuroscience

Circadian clock genes and sleep homeostasis

(2009) P. Franken et al.   EUROPEAN JOURNAL OF NEUROSCIENCE

An Architectural Role for a Nuclear Noncoding RNA: NEAT1 RNA Is Essential for the Structure of Paraspeckles

(2009) Christine M. Clemson et al.   MOLECULAR CELL

Sleep Deprivation Effects on Circadian Clock Gene Expression in the Cerebral Cortex Parallel Electroencephalographic Differences among Mouse Strains

(2008) J. P. Wisor et al.   JOURNAL OF NEUROSCIENCE

A Transcriptome Database for Astrocytes, Neurons, and Oligodendrocytes: A New Resource for Understanding Brain Development and Function

(2008) J. D. Cahoy et al.   JOURNAL OF NEUROSCIENCE