Transcriptomic changes in relation to early-life events in the gilthead sea bream (Sparus aurata)

Early life stress and effects at subsequent stages of development in European sea bass (D. labrax)

(2015) A. Tsalafouta et al.   AQUACULTURE

Nutrigenomic profiling of transcriptional processes affected in liver and distal intestine in response to a soybean meal-induced nutritional stress in Atlantic salmon (Salmo salar)

(2015) Christian De Santis et al.   Comparative Biochemistry and Physiology D-Genomics & Proteomics

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Liver transcriptome analysis in gilthead sea bream upon exposure to low temperature

(2014) Alba N Mininni et al.   BMC GENOMICS

Acute stress response in gilthead sea bream (Sparus aurataL.) is time-of-day dependent: Physiological and oxidative stress indicators

(2014) Luisa María Vera et al.   CHRONOBIOLOGY INTERNATIONAL

Ontogenesis of the HPI axis and molecular regulation of the cortisol stress response during early development in Dicentrarchus labrax.

(2014) A. Tsalafouta et al.   Scientific Reports

Complex structural and regulatory evolution of the pro-opiomelanocortin gene family

(2013) Rayna M. Harris et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

GeneMANIA Prediction Server 2013 Update

(2013) Khalid Zuberi et al.   NUCLEIC ACIDS RESEARCH

Fantastically plastic: fish larvae equipped for a new world

(2013) Karin Pittman et al.   Reviews in Aquaculture

Role of glucocorticoid in developmental programming: Evidence from zebrafish

(2012) Dinushan Nesan et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Effects of Chronic Cortisol Administration on Global Expression of GR and the Liver Transcriptome in Sparus aurata

(2012) Mariana Teles et al.   MARINE BIOTECHNOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Species specificity in the magnitude and duration of the acute stress response in Mediterranean marine fish in culture

(2011) E. Fanouraki et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Onset of the primary stress in European sea bass Dicentrarhus labrax, as indicated by whole body cortisol in relation to glucocorticoid receptor during early development

(2010) M. Pavlidis et al.   AQUACULTURE

Use of microarray technology to assess the time course of liver stress response after confinement exposure in gilthead sea bream (Sparus aurata L.)

(2010) Josep A Calduch-Giner et al.   BMC GENOMICS

Divergence of duplicate POMC genes in gilthead sea bream Sparus auratus

(2010) J.C.R. Cardoso et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Stress transcriptomics in fish: A role for genomic cortisol signaling

(2009) Neelakanteswar Aluru et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Water cortisol is a reliable indicator of stress in European sea bass, Dicentrarchus labrax

(2008) Fanouraki et al.   BEHAVIOUR