Genome wide characterization of simple sequence repeats in watermelon genome and their application in comparative mapping and genetic diversity analysis

Origin and emergence of the sweet dessert watermelon,Citrullus lanatus

(2015) Harry S. Paris   ANNALS OF BOTANY

Development of chromosome-specific markers with high polymorphism for allotetraploid cotton based on genome-wide characterization of simple sequence repeats in diploid cottons (Gossypium arboreum L. and Gossypium raimondii Ulbrich)

(2015) Cairui Lu et al.   BMC GENOMICS

Genetic analysis and chromosome mapping of resistance to Fusarium oxysporum f. sp. niveum (FON) race 1 and race 2 in watermelon (Citrullus lanatus L.)

(2015) Yi Ren et al.   MOLECULAR BREEDING

Genome-Wide Mining, Characterization and Development of Microsatellite Markers in Gossypium Species

(2015) Qiong Wang et al.   Scientific Reports

Development of highly polymorphic simple sequence repeat markers using genome-wide microsatellite variant analysis in Foxtail millet [Setaria italica (L.) P. Beauv.]

(2014) Shuo Zhang et al.   BMC GENOMICS

A Genome-Wide Scan of Selective Sweeps and Association Mapping of Fruit Traits Using Microsatellite Markers in Watermelon

(2014) U. K. Reddy et al.   JOURNAL OF HEREDITY

Watermelon origin solved with molecular phylogenetics including Linnaean material: another example of museomics

(2014) Guillaume Chomicki et al.   NEW PHYTOLOGIST

A major QTL associated with Fusarium oxysporum race 1 resistance identified in genetic populations derived from closely related watermelon lines using selective genotyping and genotyping-by-sequencing for SNP discovery

(2014) Shaunese Lambel et al.   THEORETICAL AND APPLIED GENETICS

Molecular mapping reveals structural rearrangements and quantitative trait loci underlying traits with local adaptation in semi-wild Xishuangbanna cucumber (Cucumis sativus L. var. xishuangbannanesis Qi et Yuan)

(2014) Kailiang Bo et al.   THEORETICAL AND APPLIED GENETICS

In silico mining of putative microsatellite markers from whole genome sequence of water buffalo (Bubalus bubalis) and development of first BuffSatDB

(2013) Sarika et al.   BMC GENOMICS

Development and characterization of microsatellite markers for Morus spp. and assessment of their transferability to other closely related species

(2013) Balachandran Mathithumilan et al.   BMC PLANT BIOLOGY

Genome-Wide Microsatellite Characterization and Marker Development in the Sequenced Brassica Crop Species

(2013) J. Shi et al.   DNA RESEARCH

Development, cross-species/genera transferability of novel EST-SSR markers and their utility in revealing population structure and genetic diversity in sugarcane

(2013) Ram K. Singh et al.   GENE

Characterization and high cross-species transferability of microsatellite markers from the floral transcriptome ofAspidistra saxicola(Asparagaceae)

(2013) Danni Huang et al.   Molecular Ecology Resources

Next-generation sequencing, FISH mapping and synteny-based modeling reveal mechanisms of decreasing dysploidy inCucumis

(2013) Luming Yang et al.   PLANT JOURNAL

Development of eSSR-Markers in Setaria italica and Their Applicability in Studying Genetic Diversity, Cross-Transferability and Comparative Mapping in Millet and Non-Millet Species

(2013) Kajal Kumari et al.   PLoS One

Fine mapping of the pleiotropic locus B for black spine and orange mature fruit color in cucumber identifies a 50 kb region containing a R2R3-MYB transcription factor

(2013) Yuhong Li et al.   THEORETICAL AND APPLIED GENETICS

GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update

(2012) R. Peakall et al.   BIOINFORMATICS

Whole genome comparisons of Fragaria, Prunus and Malus reveal different modes of evolution between Rosaceous subfamilies

(2012) Sook Jung et al.   BMC GENOMICS

High frequency oligonucleotides: targeting active gene (HFO-TAG) markers revealed wide genetic diversity among Citrullus spp. accessions useful for enhancing disease or pest resistance in watermelon cultivars

(2012) Amnon Levi et al.   GENETIC RESOURCES AND CROP EVOLUTION

Transferability and characterization of simple sequence repeat markers from Anacardium occidentale to A. humile (Anacardiaceae)

(2012) L.G. Cota et al.   GENETICS AND MOLECULAR RESEARCH

The draft genome of watermelon (Citrullus lanatus) and resequencing of 20 diverse accessions

(2012) Shaogui Guo et al.   NATURE GENETICS

Chromosome rearrangements during domestication of cucumber as revealed by high-density genetic mapping and draft genome assembly

(2012) Luming Yang et al.   PLANT JOURNAL

A High Resolution Genetic Map Anchoring Scaffolds of the Sequenced Watermelon Genome

(2012) Yi Ren et al.   PLoS One

Genetic Diversity and Population Structure of Cucumber (Cucumis sativus L.)

(2012) Jing Lv et al.   PLoS One

The genome of melon (Cucumis melo L.)

(2012) J. Garcia-Mas et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparison of SNPs and microsatellites for assessing the genetic structure of chicken populations

(2011) C. Gärke et al.   ANIMAL GENETICS

Syntenic relationships between cucumber (Cucumis sativus L.) and melon (C. melo L.) chromosomes as revealed by comparative genetic mapping

(2011) Dawei Li et al.   BMC GENOMICS

Identification and validation of a core set of microsatellite markers for genetic diversity analysis in watermelon, Citrullus lanatus Thunb. Matsum. & Nakai

(2011) Haiying Zhang et al.   EUPHYTICA

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genome-Wide Distribution and Organization of Microsatellites in Plants: An Insight into Marker Development in Brachypodium

(2011) Humira Sonah et al.   PLoS One

Genome-wide characterization of simple sequence repeats in cucumber (Cucumis sativus L.)

(2010) Pablo F Cavagnaro et al.   BMC GENOMICS

Molecular cytogenetic mapping of Cucumis sativus and C. melo using highly repetitive DNA sequences

(2010) Dal-Hoe Koo et al.   CHROMOSOME RESEARCH

The genetic characterization of Turkish watermelon (Citrullus lanatus) accessions using RAPD markers

(2010) Ilknur Solmaz et al.   GENETIC RESOURCES AND CROP EVOLUTION

Grafting for Management of Southern Root-Knot Nematode, Meloidogyne incognita, in Watermelon

(2010) Judy A. Thies et al.   PLANT DISEASE

Development of 1,030 genomic SSR markers in switchgrass

(2010) Y. W. Wang et al.   THEORETICAL AND APPLIED GENETICS

Characterization of microsatellites and gene contents from genome shotgun sequences of mungbean (Vigna radiata (L.) Wilczek)

(2009) Sithichoke Tangphatsornruang et al.   BMC PLANT BIOLOGY

Circos: An information aesthetic for comparative genomics

(2009) M. Krzywinski et al.   GENOME RESEARCH

The genome of the cucumber, Cucumis sativus L.

(2009) Sanwen Huang et al.   NATURE GENETICS

Genome comparisons reveal a dominant mechanism of chromosome number reduction in grasses and accelerated genome evolution in Triticeae

(2009) M. C. Luo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Gourds afloat: a dated phylogeny reveals an Asian origin of the gourd family (Cucurbitaceae) and numerous oversea dispersal events

(2008) H. Schaefer et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES