Dietary breadth is positively correlated with venom complexity in cone snails

Comparison of the Venom Peptides and Their Expression in Closely RelatedConusSpecies: Insights into Adaptive Post-speciation Evolution ofConusExogenomes

(2015) Neda Barghi et al.   Genome Biology and Evolution

Insights into the origins of fish hunting in venomous cone snails from studies ofConus tessulatus

(2015) Joseph W. Aman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Optimized deep-targeted proteotranscriptomic profiling reveals unexploredConustoxin diversity and novel cysteine frameworks

(2015) Vincent Lavergne et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Specialized insulin is used for chemical warfare by fish-hunting cone snails

(2015) Helena Safavi-Hemami et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Effects of geographical heterogeneity in species interactions on the evolution of venom genes

(2015) D. Chang et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Venom gland transcriptomics for identifying, cataloging, and characterizing venom proteins in snakes

(2015) Rajeev Kungur Brahma et al.   TOXICON

ExSPAnder: a universal repeat resolver for DNA fragment assembly

(2014) A. D. Prjibelski et al.   BIOINFORMATICS

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Dramatic expansion of the black widow toxin arsenal uncovered by multi-tissue transcriptomics and venom proteomics

(2014) Robert A Haney et al.   BMC GENOMICS

High Conopeptide Diversity in Conus tribblei Revealed Through Analysis of Venom Duct Transcriptome Using Two High-Throughput Sequencing Platforms

(2014) Neda Barghi et al.   MARINE BIOTECHNOLOGY

Conotoxin Gene Superfamilies

(2014) Samuel Robinson et al.   Marine Drugs

Molecular phylogeny and evolution of the cone snails (Gastropoda, Conoidea)

(2014) N. Puillandre et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The origin of annelids

(2014) Luke Parry et al.   PALAEONTOLOGY

Diversity of Conotoxin Gene Superfamilies in the Venomous Snail, Conus victoriae

(2014) Samuel D. Robinson et al.   PLoS One

The genesis of an exceptionally lethal venom in the timber rattlesnake (Crotalus horridus) revealed through comparative venom-gland transcriptomics

(2013) Darin R Rokyta et al.   BMC GENOMICS

Systematic interrogation of the Conus marmoreus venom duct transcriptome with ConoSorter reveals 158 novel conotoxins and 13 new gene superfamilies

(2013) Vincent Lavergne et al.   BMC GENOMICS

Transcriptomic Messiness in the Venom Duct ofConus milesContributes to Conotoxin Diversity

(2013) Ai-hua Jin et al.   MOLECULAR & CELLULAR PROTEOMICS

Various Conotoxin Diversifications Revealed by a Venomic Study ofConus flavidus

(2013) Aiping Lu et al.   MOLECULAR & CELLULAR PROTEOMICS

Phylogeny-Based Comparative Analysis of Venom Proteome Variation in a Clade of Rattlesnakes (Sistrurus sp.)

(2013) H. Lisle Gibbs et al.   PLoS One

Telescoper: de novo assembly of highly repetitive regions

(2012) Ma'ayan Bresler et al.   BIOINFORMATICS

Elucidation of the molecular envenomation strategy of the cone snail Conus geographus through transcriptome sequencing of its venom duct

(2012) Hao Hu et al.   BMC GENOMICS

The venom-gland transcriptome of the eastern diamondback rattlesnake (Crotalus adamanteus)

(2012) Darin R Rokyta et al.   BMC GENOMICS

Molecular Phylogeny, Classification and Evolution of Conopeptides

(2012) N. Puillandre et al.   JOURNAL OF MOLECULAR EVOLUTION

Deep Venomics Reveals the Mechanism for Expanded Peptide Diversity in Cone Snail Venom

(2012) Sébastien Dutertre et al.   MOLECULAR & CELLULAR PROTEOMICS

Extensive and Continuous Duplication Facilitates Rapid Evolution and Diversification of Gene Families

(2012) Dan Chang et al.   MOLECULAR BIOLOGY AND EVOLUTION

Insights into bilaterian evolution from three spiralian genomes

(2012) Oleg Simakov et al.   NATURE

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Measurement of mRNA abundance using RNA-seq data: RPKM measure is inconsistent among samples

(2012) Günter P. Wagner et al.   THEORY IN BIOSCIENCES

Diversity and evolution of conotoxins in Conus virgo, Conus eburneus, Conus imperialis and Conus marmoreus from the South China Sea

(2012) Zhuguo Liu et al.   TOXICON

Complex cocktails: the evolutionary novelty of venoms

(2012) Nicholas R. Casewell et al.   TRENDS IN ECOLOGY & EVOLUTION

Snake venom: From fieldwork to the clinic

(2011) Freek J. Vonk et al.   BIOESSAYS

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Accuracy and quality assessment of 454 GS-FLX Titanium pyrosequencing

(2011) André Gilles et al.   BMC GENOMICS

Characterization of the Conus bullatus genome and its venom-duct transcriptome

(2011) Hao Hu et al.   BMC GENOMICS

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

ConoServer: updated content, knowledge, and discovery tools in the conopeptide database

(2011) Q. Kaas et al.   NUCLEIC ACIDS RESEARCH

Venom lethality and diet: Differential responses of natural prey and model organisms to the venom of the saw-scaled vipers (Echis)

(2011) D.P. Richards et al.   TOXICON

Evaluation of genomic high-throughput sequencing data generated on Illumina HiSeq and Genome Analyzer systems

(2011) André E Minoche et al.   GENOME BIOLOGY

Picante: R tools for integrating phylogenies and ecology

(2010) S. W. Kembel et al.   BIOINFORMATICS

Conopeptide characterization and classifications: An analysis using ConoServer

(2010) Quentin Kaas et al.   TOXICON

Diversity of conotoxin types from Conus californicus reflects a diversity of prey types and a novel evolutionary history

(2010) C.A. Elliger et al.   TOXICON

The Toxicogenomic Multiverse: Convergent Recruitment of Proteins Into Animal Venoms

(2009) Bryan G. Fry et al.   Annual Review of Genomics and Human Genetics

Comparative venom gland transcriptome surveys of the saw-scaled vipers (Viperidae: Echis) reveal substantial intra-family gene diversity and novel venom transcripts

(2009) Nicholas R Casewell et al.   BMC GENOMICS

Ecological Release and Venom Evolution of a Predatory Marine Snail at Easter Island

(2009) Thomas F. Duda et al.   PLoS One

Coevolution of diet and prey-specific venom activity supports the role of selection in snake venom evolution

(2009) A. Barlow et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Transcriptome analysis of the venom glands of the Chinese wolf spider Lycosa singoriensis

(2009) Yongqun Zhang et al.   ZOOLOGY

Variation and evolution of toxin gene expression patterns of six closely related venomous marine snails

(2008) T. F. DUDA JR et al.   MOLECULAR ECOLOGY

Evolution of ecological specialization and venom of a predatory marine gastropod

(2008) E. A. REMIGIO et al.   MOLECULAR ECOLOGY

Hidden diversity in a hyperdiverse gastropod genus: Discovery of previously unidentified members of a Conus species complex

(2008) T DUDAJR et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION