Impact of thymine glycol damage on DNA duplex energetics: Correlations with lesion-induced biochemical and structural consequences

Boron and nucleic acid chemistries: merging the best of both worlds

(2013) Anthony R. Martin et al.   CHEMICAL SOCIETY REVIEWS

Nucleotide Excision Repair Efficiencies of Bulky Carcinogen–DNA Adducts Are Governed by a Balance between Stabilizing and Destabilizing Interactions

(2012) Yuqin Cai et al.   BIOCHEMISTRY

Thymidine glycol: the effect on DNA molecular structure and enzymatic processing

(2012) Nina G. Dolinnaya et al.   BIOCHIMIE

DNA polymerase POLQ and cellular defense against DNA damage

(2012) Matthew J. Yousefzadeh et al.   DNA REPAIR

Entropy-enthalpy transduction caused by conformational shifts can obscure the forces driving protein-ligand binding

(2012) A. T. Fenley et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structural Characterization of Viral Ortholog of Human DNA Glycosylase NEIL1 Bound to Thymine Glycol or 5-Hydroxyuracil-containing DNA

(2011) Kayo Imamura et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

A Crystallographic Study of the Role of Sequence Context in Thymine Glycol Bypass by a Replicative DNA Polymerase Serendipitously Sheds Light on the Exonuclease Complex

(2011) Pierre Aller et al.   JOURNAL OF MOLECULAR BIOLOGY

Structural, energetic and dynamic properties of guanine(C8)–thymine(N3) cross-links in DNA provide insights on susceptibility to nucleotide excision repair

(2011) Shuang Ding et al.   NUCLEIC ACIDS RESEARCH

Resistance of bulky DNA lesions to nucleotide excision repair can result from extensive aromatic lesion–base stacking interactions

(2011) Dara A. Reeves et al.   NUCLEIC ACIDS RESEARCH

Promiscuous DNA synthesis by human DNA polymerase θ

(2011) Matthew Hogg et al.   NUCLEIC ACIDS RESEARCH

Novel post-synthetic generation, isomeric resolution, and characterization of Fapy-dG within oligodeoxynucleotides: differential anomeric impacts on DNA duplex properties

(2011) Mark Lukin et al.   NUCLEIC ACIDS RESEARCH

Crystal Structure of a Replicative DNA Polymerase Bound to the Oxidized Guanine Lesion Guanidinohydantoin ,

(2010) Pierre Aller et al.   BIOCHEMISTRY

Error-free replicative bypass of thymine glycol by the combined action of DNA polymerases   and   in human cells

(2010) J.-H. Yoon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Thecis-(5R,6S)-Thymine Glycol Lesion Occupies the Wobble Position When Mismatched with Deoxyguanosine in DNA

(2009) Kyle L. Brown et al.   BIOCHEMISTRY

Efficient Formation of the Tandem Thymine Glycol/8-Oxo-7,8-dihydroguanine Lesion in Isolated DNA and the Mutagenic and Cytotoxic Properties of the Tandem Lesions inEscherichia coliCells

(2009) Bifeng Yuan et al.   CHEMICAL RESEARCH IN TOXICOLOGY

DNA Duplex Length and Salt Concentration Dependence of Enthalpy−Entropy Compensation Parameters for DNA Melting

(2009) E. B. Starikov et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Energetic signatures of single base bulges: thermodynamic consequences and biological implications

(2009) Conceição A. S. A. Minetti et al.   NUCLEIC ACIDS RESEARCH

Kinetics of deamination and Cu(II)/H 2 O 2 /Ascorbate-induced formation of 5-methylcytosine glycol at CpG sites in duplex DNA

(2009) Huachuan Cao et al.   NUCLEIC ACIDS RESEARCH

Processing of thymine glycol in a clustered DNA damage site: mutagenic or cytotoxic

(2009) Sophie Bellon et al.   NUCLEIC ACIDS RESEARCH

Binding of the human nucleotide excision repair proteins XPA and XPC/HR23B to the 5 R -thymine glycol lesion and structure of the cis -(5 R ,6 S ) thymine glycol epimer in the 5′-GTgG-3′ sequence: destabilization of two base pairs at the lesion site

(2009) Kyle L. Brown et al.   NUCLEIC ACIDS RESEARCH

Interconversion of thecis-5R,6S- andtrans-5R,6R-Thymine Glycol Lesions in Duplex DNA

(2008) Kyle L. Brown et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

A continuous hyperchromicity assay to characterize the kinetics and thermodynamics of DNA lesion recognition and base excision

(2008) C. A. S. A. Minetti et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA