Different nitrogen sources speed recovery from corallivory and uniquely alter the microbiome of a reef-building coral

Multiple stressors interact primarily through antagonism to drive changes in the coral microbiome

(2019) Rebecca L. Maher et al.   Scientific Reports

Nitrogen Identity Drives Differential Impacts of Nutrients on Coral Bleaching and Mortality

(2019) Deron E. Burkepile et al.   ECOSYSTEMS

Spatial and temporal patterns of mass bleaching of corals in the Anthropocene

(2018) Terry P. Hughes et al.   SCIENCE

Parendozoicomonas haliclonae gen. nov. sp. nov. isolated from a marine sponge of the genus Haliclona and description of the family Endozoicomonadaceae fam. nov. comprising the genera Endozoicomonas , Parendozoicomonas , and Kistimonas

(2018) Jens-Ole Bartz et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Metaorganisms in extreme environments: do microbes play a role in organismal adaptation?

(2018) Corinna Bang et al.   ZOOLOGY

Systematic Revision of Symbiodiniaceae Highlights the Antiquity and Diversity of Coral Endosymbionts

(2018) Todd C. LaJeunesse et al.   CURRENT BIOLOGY

Coral-dwelling fish moderate bleaching susceptibility of coral hosts

(2018) T. J. Chase et al.   PLoS One

Elevated ammonium reduces the negative effect of heat stress on the stony coral Pocillopora damicornis

(2017) Zhi Zhou et al.   MARINE POLLUTION BULLETIN

Resilience of the prokaryotic microbial community of Acropora digitifera to elevated temperature

(2017) Andrian P. Gajigan et al.   MicrobiologyOpen

Stress and stability: applying the Anna Karenina principle to animal microbiomes

(2017) Jesse R. Zaneveld et al.   Nature Microbiology

Insights into the Coral Microbiome: Underpinning the Health and Resilience of Reef Ecosystems

(2016) David G. Bourne et al.   Annual Review of Microbiology

Diversity and function of prevalent symbiotic marine bacteria in the genus Endozoicomonas

(2016) Matthew J. Neave et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Calcification of the main reef-building coral species on the Pacific coast of southern Mexico

(2016) Francisco Medellin-Maldonado   CIENCIAS MARINAS

Large-amplitude internal waves sustain coral health during thermal stress

(2016) Gertraud M. Schmidt et al.   CORAL REEFS

Recurrent partial mortality events in winter shape the dynamics of the zooxanthellate coral Oculina patagonica at high latitude in the Mediterranean

(2016) Eduard Serrano et al.   CORAL REEFS

Microbial dinitrogen fixation in coral holobionts exposed to thermal stress and bleaching

(2016) Ulisse Cardini et al.   ENVIRONMENTAL MICROBIOLOGY

The microbiome of coral surface mucus has a key role in mediating holobiont health and survival upon disturbance

(2016) Bettina Glasl et al.   ISME Journal

Least-Squares Means: TheRPackagelsmeans

(2016) Russell V. Lenth   Journal of Statistical Software

Ecological and genetic variation in reef-building corals on four Society Islands

(2016) Peter J. Edmunds et al.   LIMNOLOGY AND OCEANOGRAPHY

Lesion recovery and the bacterial microbiome in two Caribbean gorgonian corals

(2016) Kartick P. Shirur et al.   MARINE BIOLOGY

Coral microbial community dynamics in response to anthropogenic impacts near a major city in the central Red Sea

(2016) Maren Ziegler et al.   MARINE POLLUTION BULLETIN

Overfishing and nutrient pollution interact with temperature to disrupt coral reefs down to microbial scales

(2016) Jesse R. Zaneveld et al.   Nature Communications

Coral-Associated Actinobacteria: Diversity, Abundance, and Biotechnological Potentials

(2016) Huda M. Mahmoud et al.   Frontiers in Microbiology

Bacterial community diversity of the deep-sea octocoralParamuricea placomus

(2016) Christina A. Kellogg et al.   PeerJ

Minor revision to V4 region SSU rRNA 806R gene primer greatly increases detection of SAR11 bacterioplankton

(2015) A Apprill et al.   AQUATIC MICROBIAL ECOLOGY

Fish-derived nutrient hotspots shape coral reef benthic communities

(2015) Andrew A. Shantz et al.   ECOLOGICAL APPLICATIONS

Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time series and global field samples

(2015) Alma E. Parada et al.   ENVIRONMENTAL MICROBIOLOGY

Habitat-specific environmental conditions primarily control the microbiomes of the coral Seriatopora hystrix

(2015) Olga Pantos et al.   ISME Journal

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

New insights into carbon acquisition and exchanges within the coral–dinoflagellate symbiosis under NH4+and NO3−supply

(2015) Leïla Ezzat et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Nitrogen cycling in corals: the key to understanding holobiont functioning?

(2015) Nils Rädecker et al.   TRENDS IN MICROBIOLOGY

Context-dependent effects of nutrient loading on the coral–algal mutualism

(2014) Andrew A. Shantz et al.   ECOLOGY

Climate change affects key nitrogen-fixing bacterial populations on coral reefs

(2014) Henrique F Santos et al.   ISME Journal

Effects of simulated fish predation on small colonies of massive Porites spp. and Pocillopora meandrina

(2014) CM Cameron et al.   MARINE ECOLOGY PROGRESS SERIES

Impacts of nutrient enrichment on coral reefs: new perspectives and implications for coastal management and reef survival

(2014) Cecilia D’Angelo et al.   Current Opinion in Environmental Sustainability

Subsampled open-reference clustering creates consistent, comprehensive OTU definitions and scales to billions of sequences

(2014) Jai Ram Rideout et al.   PeerJ

Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform

(2013) James J. Kozich et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Chronic nutrient enrichment increases prevalence and severity of coral disease and bleaching

(2013) Rebecca L. Vega Thurber et al.   GLOBAL CHANGE BIOLOGY

Does Trophic Status Enhance or Reduce the Thermal Tolerance of Scleractinian Corals? A Review, Experiment and Conceptual Framework

(2013) Katharina E. Fabricius et al.   PLoS One

In-situ Effects of Eutrophication and Overfishing on Physiology and Bacterial Diversity of the Red Sea Coral Acropora hemprichii

(2013) Christian Jessen et al.   PLoS One

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Changes in Bleaching Susceptibility among Corals Subject to Ocean Warming and Recurrent Bleaching in Moorea, French Polynesia

(2013) Morgan S. Pratchett et al.   PLoS One

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

(2011) Daniel McDonald et al.   ISME Journal

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Phylogenetic characterization of culturable actinomycetes associated with the mucus of the coral Acropora digitifera from Gulf of Mannar

(2010) Paramasivam Nithyanand et al.   FEMS MICROBIOLOGY LETTERS

Changes in sulfate-reducing bacterial populations during the onset of black band disease

(2010) David G Bourne et al.   ISME Journal

Elevated seawater temperature causes a microbial shift on crustose coralline algae with implications for the recruitment of coral larvae

(2010) Nicole S Webster et al.   ISME Journal

Differential response to cold and warm water conditions in Pocillopora colonies from the Central Mexican Pacific

(2010) A.P. Rodríguez-Troncoso et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

The physiological response of reef corals to diel fluctuations in seawater temperature

(2010) Hollie M. Putnam et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Response of Pocillopora verrucosa to corallivory varies with environmental conditions

(2010) HS Lenihan et al.   MARINE ECOLOGY PROGRESS SERIES

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Improving indicator species analysis by combining groups of sites

(2010) Miquel De Cáceres et al.   OIKOS

Distinct signalling pathways and transcriptome response signatures differentiate ammonium- and nitrate-supplied plants

(2010) KURT PATTERSON et al.   PLANT CELL AND ENVIRONMENT

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Do the organic sulfur compounds DMSP and DMS drive coral microbial associations?

(2010) Jean-Baptiste Raina et al.   TRENDS IN MICROBIOLOGY

PyNAST: a flexible tool for aligning sequences to a template alignment

(2009) J. G. Caporaso et al.   BIOINFORMATICS

Associations between species and groups of sites: indices and statistical inference

(2009) Miquel De Cáceres et al.   ECOLOGY

Diversity of aerobic and anaerobic ammonia-oxidizing bacteria in marine sponges

(2009) Naglaa M Mohamed et al.   ISME Journal

Identification and Ecophysiological Characterization of Epiphytic Protein-Hydrolyzing Saprospiraceae ("Candidatus Epiflobacter" spp.) in Activated Sludge

(2008) Y. Xia et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Diversity and functional importance of coral-feeding fishes on tropical coral reefs

(2008) Andrew J. Cole et al.   FISH AND FISHERIES

Effects of sheltering fish on growth of their host corals

(2008) Sally J. Holbrook et al.   MARINE BIOLOGY

Impact of coral predators on tropical reefs

(2008) RD Rotjan et al.   MARINE ECOLOGY PROGRESS SERIES

Metabolic interactions between algal symbionts and invertebrate hosts

(2008) DAVID YELLOWLEES et al.   PLANT CELL AND ENVIRONMENT