Adaptation in structured populations and fuzzy boundaries between hard and soft sweeps
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Title
Adaptation in structured populations and fuzzy boundaries between hard and soft sweeps
Authors
Keywords
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Journal
PLoS Computational Biology
Volume 15, Issue 11, Pages e1007426
Publisher
Public Library of Science (PLoS)
Online
2019-11-12
DOI
10.1371/journal.pcbi.1007426
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Note: Only part of the references are listed.- Supervised Machine Learning for Population Genetics: A New Paradigm
- (2018) Daniel R. Schrider et al. TRENDS IN GENETICS
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- (2018) Benjamin C Haller et al. MOLECULAR BIOLOGY AND EVOLUTION
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- (2017) Pavlos Pavlidis et al. Journal of Biological Research-Thessaloniki
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- (2016) Andrew D. Kern et al. BIOINFORMATICS
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- (2016) Michael DeGiorgio et al. BIOINFORMATICS
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- (2015) Ha My T. Vy et al. GENETICS
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- (2015) Alexandra I. Vatsiou et al. MOLECULAR ECOLOGY
- A new FST-based method to uncover local adaptation using environmental variables
- (2015) Pierre de Villemereuil et al. Methods in Ecology and Evolution
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- (2014) T. M. Beissinger et al. GENETICS
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- (2014) B. A. Wilson et al. GENETICS
- Global Footprints of Purifying Selection on Toll-Like Receptor Genes Primarily Associated with Response to Bacterial Infections in Humans
- (2014) Souvik Mukherjee et al. Genome Biology and Evolution
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- (2014) Anna Ferrer-Admetlla et al. MOLECULAR BIOLOGY AND EVOLUTION
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- (2014) M. Rafajlović et al. THEORETICAL POPULATION BIOLOGY
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- (2014) Jeffrey D Jensen Nature Communications
- Stochastic patterns of polymorphism after a selective sweep over a subdivided population
- (2013) YUSEOB KIM Genetics Research
- Pervasive selection or is it…? why areFSToutliers sometimes so frequent?
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- (2011) MATHIEU GAUTIER et al. MOLECULAR ECOLOGY
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- (2011) S. Gravel et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Classic Selective Sweeps Were Rare in Recent Human Evolution
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- THE DISTINCTIVE FOOTPRINTS OF LOCAL HITCHHIKING IN A VARIED ENVIRONMENT AND GLOBAL HITCHHIKING IN A SUBDIVIDED POPULATION
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- (2010) J. C. Roach et al. SCIENCE
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- (2009) S. Boitard et al. GENETICS
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- (2009) MELISSA J. HUBISZ et al. Molecular Ecology Resources
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- (2008) John A. Sved et al. AMERICAN JOURNAL OF HUMAN GENETICS
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