Diversity and geochemical community assembly processes of the living rare biosphere in a sand-and-gravel aquifer ecosystem in the Midwestern United States
Published 2019 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Diversity and geochemical community assembly processes of the living rare biosphere in a sand-and-gravel aquifer ecosystem in the Midwestern United States
Authors
Keywords
-
Journal
Scientific Reports
Volume 9, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2019-09-17
DOI
10.1038/s41598-019-49996-z
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Primer selection impacts specific population abundances but not community dynamics in a monthly time-series 16S rRNA gene amplicon analysis of coastal marine bacterioplankton
- (2018) Emma K. Wear et al. ENVIRONMENTAL MICROBIOLOGY
- Biogeographic patterns of abundant and rare bacterioplankton in three subtropical bays resulting from selective and neutral processes
- (2018) Yuanyuan Mo et al. ISME Journal
- Evaluation of different 16S rRNA gene V regions for exploring bacterial diversity in a eutrophic freshwater lake
- (2018) Junyi Zhang et al. SCIENCE OF THE TOTAL ENVIRONMENT
- Community Assembly Processes of the Microbial Rare Biosphere
- (2018) Xiu Jia et al. TRENDS IN MICROBIOLOGY
- Evaluating Established Methods for Rumen 16S rRNA Amplicon Sequencing With Mock Microbial Populations
- (2018) Emily McGovern et al. Frontiers in Microbiology
- Investigation of Detection Limits and the Influence of DNA Extraction and Primer Choice on the Observed Microbial Communities in Drinking Water Samples Using 16S rRNA Gene Amplicon Sequencing
- (2018) Jakob Brandt et al. Frontiers in Microbiology
- The diversity and biogeography of abundant and rare intertidal marine microeukaryotes explained by environment and dispersal limitation
- (2017) Wenjing Zhang et al. ENVIRONMENTAL MICROBIOLOGY
- Where less may be more: how the rare biosphere pulls ecosystems strings
- (2017) Alexandre Jousset et al. ISME Journal
- Similar community assembly mechanisms underlie similar biogeography of rare and abundant bacteria in lakes on Yungui Plateau, China
- (2017) Jingqiu Liao et al. LIMNOLOGY AND OCEANOGRAPHY
- Comparison of DNA-, PMA-, and RNA-based 16S rRNA Illumina sequencing for detection of live bacteria in water
- (2017) Ru Li et al. Scientific Reports
- Sensitivity and correlation of hypervariable regions in 16S rRNA genes in phylogenetic analysis
- (2016) Bo Yang et al. BMC BIOINFORMATICS
- Active populations of rare microbes in oceanic environments as revealed by bromodeoxyuridine incorporation and 454 tag sequencing
- (2016) Koji Hamasaki et al. GENE
- From Rare to Dominant: a Fine-Tuned Soil Bacterial Bloom during Petroleum Hydrocarbon Bioremediation
- (2015) Sebastián Fuentes et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Rare taxa have potential to make metabolic contributions in enhanced biological phosphorus removal ecosystems
- (2015) Christopher E. Lawson et al. ENVIRONMENTAL MICROBIOLOGY
- The biogeography of abundant and rare bacterioplankton in the lakes and reservoirs of China
- (2015) Lemian Liu et al. ISME Journal
- Ecology and exploration of the rare biosphere
- (2015) Michael D. J. Lynch et al. NATURE REVIEWS MICROBIOLOGY
- Improved Bacterial 16S rRNA Gene (V4 and V4-5) and Fungal Internal Transcribed Spacer Marker Gene Primers for Microbial Community Surveys
- (2015) William Walters et al. mSystems
- Correlating Microbial Diversity Patterns with Geochemistry in an Extreme and Heterogeneous Environment of Mine Tailings
- (2014) Jun Liu et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Rare but active taxa contribute to community dynamics of benthic biofilms in glacier-fed streams
- (2014) Linda Wilhelm et al. ENVIRONMENTAL MICROBIOLOGY
- Spatiotemporal distributions of rare bacterioplankton populations indicate adaptive strategies in the oligotrophic ocean
- (2013) KL Vergin et al. AQUATIC MICROBIAL ECOLOGY
- Functional microbial diversity explains groundwater chemistry in a pristine aquifer
- (2013) Theodore M Flynn et al. BMC MICROBIOLOGY
- Evaluating rRNA as an indicator of microbial activity in environmental communities: limitations and uses
- (2013) Steven J Blazewicz et al. ISME Journal
- Microbial minorities modulate methane consumption through niche partitioning
- (2013) Paul LE Bodelier et al. ISME Journal
- Phylogenetic beta diversity in bacterial assemblages across ecosystems: deterministic versus stochastic processes
- (2013) Jianjun Wang et al. ISME Journal
- Patterns and Processes of Microbial Community Assembly
- (2013) D. R. Nemergut et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- Shifts in the Microbial Community Composition of Gulf Coast Beaches Following Beach Oiling
- (2013) Ryan J. Newton et al. PLoS One
- Structure of the rare archaeal biosphere and seasonal dynamics of active ecotypes in surface coastal waters
- (2013) M. Hugoni et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- PANDAseq: paired-end assembler for illumina sequences
- (2012) Andre P Masella et al. BMC BIOINFORMATICS
- Stochastic and deterministic assembly processes in subsurface microbial communities
- (2012) James C Stegen et al. ISME Journal
- Shrinking majority of the deep biosphere
- (2012) B. B. Jorgensen PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Rare Bacterial Biosphere
- (2011) Carlos Pedrós-Alió Annual Review of Marine Science
- Microbial seed banks: the ecological and evolutionary implications of dormancy
- (2011) Jay T. Lennon et al. NATURE REVIEWS MICROBIOLOGY
- Analysis of 16S rRNA Amplicon Sequencing Options on the Roche/454 Next-Generation Titanium Sequencing Platform
- (2011) Hideyuki Tamaki et al. PLoS One
- Activity of abundant and rare bacteria in a coastal ocean
- (2011) B. J. Campbell et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Chemical and isotopic indicators of groundwater evolution in the basal sands of a buried bedrock valley in the midwestern United States: Implications for recharge, rock-water interactions, and mixing
- (2010) Keith C. Hackley et al. GEOLOGICAL SOCIETY OF AMERICA BULLETIN
- UniFrac: an effective distance metric for microbial community comparison
- (2010) Catherine Lozupone et al. ISME Journal
- A ‘rare biosphere’ microorganism contributes to sulfate reduction in a peatland
- (2010) Michael Pester et al. ISME Journal
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- Dormancy contributes to the maintenance of microbial diversity
- (2010) S. E. Jones et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Ecology of the rare microbial biosphere of the Arctic Ocean
- (2009) Pierre E. Galand et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Microbial biodiversity in groundwater ecosystems
- (2008) C. GRIEBLER et al. FRESHWATER BIOLOGY
- The ecology and biotechnology of sulphate-reducing bacteria
- (2008) Gerard Muyzer et al. NATURE REVIEWS MICROBIOLOGY
- Contrasting Microbial Community Assembly Hypotheses: A Reconciling Tale from the Río Tinto
- (2008) Carmen Palacios et al. PLoS One
- A single-cell view on the ecophysiology of anaerobic phototrophic bacteria
- (2008) N. Musat et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search