Drug-Drug Interaction Predicting by Neural Network Using Integrated Similarity

Network-Based Combinatorial CRISPR-Cas9 Screens Identify Synergistic Modules in Human Cells

(2019) Yucheng Guo et al.   ACS Synthetic Biology

Drug drug interaction extraction from the literature using a recursive neural network

(2018) Sangrak Lim et al.   PLoS One

Deep learning improves prediction of drug–drug and drug–food interactions

(2018) Jae Yong Ryu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

PubChem 2019 update: improved access to chemical data

(2018) Sunghwan Kim et al.   NUCLEIC ACIDS RESEARCH

Detecting Potential Adverse Drug Reactions Using a Deep Neural Network Model

(2018) Chi-Shiang Wang et al.   JOURNAL OF MEDICAL INTERNET RESEARCH

DRMDA: deep representations-based miRNA-disease association prediction

(2017) Xing Chen et al.   JOURNAL OF CELLULAR AND MOLECULAR MEDICINE

DrugBank 5.0: a major update to the DrugBank database for 2018

(2017) David S Wishart et al.   NUCLEIC ACIDS RESEARCH

Constructing an integrated gene similarity network for the identification of disease genes

(2017) Zhen Tian et al.   Journal of Biomedical Semantics

A deep ensemble model to predict miRNA-disease association

(2017) Laiyi Fu et al.   Scientific Reports

IPMiner: hidden ncRNA-protein interaction sequential pattern mining with stacked autoencoder for accurate computational prediction

(2016) Xiaoyong Pan et al.   BMC GENOMICS

KEGG: new perspectives on genomes, pathways, diseases and drugs

(2016) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Understanding Genotype-Phenotype Effects in Cancer via Network Approaches

(2016) Yoo-Ah Kim et al.   PLoS Computational Biology

Predicting DNA Methylation State of CpG Dinucleotide Using Genome Topological Features and Deep Networks

(2016) Yiheng Wang et al.   Scientific Reports

The SIDER database of drugs and side effects

(2015) Michael Kuhn et al.   NUCLEIC ACIDS RESEARCH

Toward link predictability of complex networks

(2015) Linyuan Lü et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Label Propagation Prediction of Drug-Drug Interactions Based on Clinical Side Effects

(2015) Ping Zhang et al.   Scientific Reports

How Far Should We Go? Perspective of Drug-Drug Interaction Studies in Drug Development

(2014) Hiroyuki Kusuhara   Drug Metabolism and Pharmacokinetics

Machine learning-based prediction of drug–drug interactions by integrating drug phenotypic, therapeutic, chemical, and genomic properties

(2014) Feixiong Cheng et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

Similarity network fusion for aggregating data types on a genomic scale

(2014) Bo Wang et al.   NATURE METHODS

Similarity-based modeling in large-scale prediction of drug-drug interactions

(2014) Santiago Vilar et al.   Nature Protocols

Drug–Drug Interaction Studies: Regulatory Guidance and An Industry Perspective

(2013) Thomayant Prueksaritanont et al.   AAPS Journal

DrugBank 4.0: shedding new light on drug metabolism

(2013) Vivian Law et al.   NUCLEIC ACIDS RESEARCH

Detection of Drug-Drug Interactions by Modeling Interaction Profile Fingerprints

(2013) Santiago Vilar et al.   PLoS One

Drug—drug interaction through molecular structure similarity analysis

(2012) Santiago Vilar et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

INDI: a computational framework for inferring drug interactions and their associated recommendations

(2012) Assaf Gottlieb et al.   Molecular Systems Biology

Data-Driven Prediction of Drug Effects and Interactions

(2012) N. P. Tatonetti et al.   Science Translational Medicine

Gaussian interaction profile kernels for predicting drug–target interaction

(2011) Twan van Laarhoven et al.   BIOINFORMATICS

Network target for screening synergistic drug combinations with application to traditional Chinese medicine

(2011) Shao Li et al.   BMC Systems Biology

DrugBank 3.0: a comprehensive resource for 'Omics' research on drugs

(2010) C. Knox et al.   NUCLEIC ACIDS RESEARCH

Use of Prescription and Over-the-counter Medications and Dietary Supplements Among Older Adults in the United States

(2008)   JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION