Genome-wide analysis of Cushion willow provides insights into alpine plant divergence in a biodiversity hotspot
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Title
Genome-wide analysis of Cushion willow provides insights into alpine plant divergence in a biodiversity hotspot
Authors
Keywords
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Journal
Nature Communications
Volume 10, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2019-11-19
DOI
10.1038/s41467-019-13128-y
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Note: Only part of the references are listed.- Mountains as Evolutionary Arenas: Patterns, Emerging Approaches, Paradigm Shifts, and Their Implications for Plant Phylogeographic Research in the Tibeto-Himalayan Region
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- Driving forces behind evolutionary radiations: Saxifraga section Ciliatae (Saxifragaceae) in the region of the Qinghai–Tibet Plateau
- (2018) J Ebersbach et al. BOTANICAL JOURNAL OF THE LINNEAN SOCIETY
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- (2018) Hajime Ikeda et al. JOURNAL OF BIOGEOGRAPHY
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- (2018) Ran Zhou et al. MOLECULAR GENETICS AND GENOMICS
- OUP accepted manuscript
- (2018) National Science Review
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- (2018) Richard J Abbott National Science Review
- Canu: scalable and accurate long-read assembly via adaptivek-mer weighting and repeat separation
- (2017) Sergey Koren et al. GENOME RESEARCH
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- (2017) Pascal Pucholt et al. MOLECULAR BIOLOGY AND EVOLUTION
- BCFtools/RoH: a hidden Markov model approach for detecting autozygosity from next-generation sequencing data
- (2016) Vagheesh Narasimhan et al. BIOINFORMATICS
- SweepFinder2: increased sensitivity, robustness and flexibility
- (2016) Michael DeGiorgio et al. BIOINFORMATICS
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- (2016) Jing Wang et al. MOLECULAR BIOLOGY AND EVOLUTION
- MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
- (2016) Sudhir Kumar et al. MOLECULAR BIOLOGY AND EVOLUTION
- BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
- (2015) Felipe A. Simão et al. BIOINFORMATICS
- A global, remote sensing-based characterization of terrestrial habitat heterogeneity for biodiversity and ecosystem modelling
- (2015) Mao-Ning Tuanmu et al. GLOBAL ECOLOGY AND BIOGEOGRAPHY
- Detecting recent selective sweeps while controlling for mutation rate and background selection
- (2015) Christian D. Huber et al. MOLECULAR ECOLOGY
- De Novo Plant Genome Assembly Based on Chromatin Interactions: A Case Study of Arabidopsis thaliana
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- Exploring population size changes using SNP frequency spectra
- (2015) Xiaoming Liu et al. NATURE GENETICS
- The ubiquity of alpine plant radiations: from the Andes to the Hengduan Mountains
- (2015) Colin E. Hughes et al. NEW PHYTOLOGIST
- Different autosomes evolved into sex chromosomes in the sister genera of Salix and Populus
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- ANGSD: Analysis of Next Generation Sequencing Data
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- High levels of gene flow and genetic diversity in Irish populations of Salix capreaL. inferred from chloroplast and nuclear SSR markers
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- The willow genome and divergent evolution from poplar after the common genome duplication
- (2014) Xiaogang Dai et al. CELL RESEARCH
- fastSTRUCTURE: Variational Inference of Population Structure in Large SNP Data Sets
- (2014) Anil Raj et al. GENETICS
- Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement
- (2014) Bruce J. Walker et al. PLoS One
- Nature and timing of Quaternary glaciation in the Himalayan–Tibetan orogen
- (2014) Lewis A. Owen et al. QUATERNARY SCIENCE REVIEWS
- Evolutionary history and underlying adaptation of alpine plants on the Qinghai-Tibet Plateau
- (2014) Jian-Quan LIU et al. Journal of Systematics and Evolution
- Molecular cytogenetic characterisation of Salix viminalis L. using repetitive DNA sequences
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- Estimating Gene Gain and Loss Rates in the Presence of Error in Genome Assembly and Annotation Using CAFE 3
- (2013) Mira V. Han et al. MOLECULAR BIOLOGY AND EVOLUTION
- Robust Demographic Inference from Genomic and SNP Data
- (2013) Laurent Excoffier et al. PLoS Genetics
- MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity
- (2012) Y. Wang et al. NUCLEIC ACIDS RESEARCH
- clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters
- (2012) Guangchuang Yu et al. OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY
- Inference of Population Splits and Mixtures from Genome-Wide Allele Frequency Data
- (2012) Joseph K. Pickrell et al. PLoS Genetics
- The variant call format and VCFtools
- (2011) P. Danecek et al. BIOINFORMATICS
- Full-length transcriptome assembly from RNA-Seq data without a reference genome
- (2011) Manfred G Grabherr et al. NATURE BIOTECHNOLOGY
- GCTA: A Tool for Genome-wide Complex Trait Analysis
- (2010) Jian Yang et al. AMERICAN JOURNAL OF HUMAN GENETICS
- Open, repair and close again: Chromatin dynamics and the response to UV-induced DNA damage
- (2010) Zoraya Palomera-Sanchez et al. DNA REPAIR
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- Evolutionary and Expression Signatures of Pseudogenes in Arabidopsis and Rice
- (2009) C. Zou et al. PLANT PHYSIOLOGY
- Using native and syntenically mapped cDNA alignments to improve de novo gene finding
- (2008) Mario Stanke et al. BIOINFORMATICS
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- (2008) B. Paten et al. GENOME RESEARCH
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