Rapid identification of pathogenic bacteria using Raman spectroscopy and deep learning
Published 2019 View Full Article
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Title
Rapid identification of pathogenic bacteria using Raman spectroscopy and deep learning
Authors
Keywords
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Journal
Nature Communications
Volume 10, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2019-10-31
DOI
10.1038/s41467-019-12898-9
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Note: Only part of the references are listed.- DeepSpectra: An end-to-end deep learning approach for quantitative spectral analysis
- (2019) Xiaolei Zhang et al. ANALYTICA CHIMICA ACTA
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- (2017) Salim Malek et al. JOURNAL OF CHEMOMETRICS
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- Assessment of Global Incidence and Mortality of Hospital-treated Sepsis. Current Estimates and Limitations
- (2016) Carolin Fleischmann et al. AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE
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- (2016) Anna K. Boardman et al. ANALYTICAL CHEMISTRY
- Prevalence of Inappropriate Antibiotic Prescriptions Among US Ambulatory Care Visits, 2010-2011
- (2016) Katherine E. Fleming-Dutra et al. JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION
- Using Raman spectroscopy to characterize biological materials
- (2016) Holly J Butler et al. Nature Protocols
- Epidemiology of community-acquired pneumonia and implications for vaccination of children living in developing and newly industrialized countries: A systematic literature review
- (2016) Rodrigo DeAntonio et al. Human Vaccines & Immunotherapeutics
- How to Optimize the Use of Blood Cultures for the Diagnosis of Bloodstream Infections? A State-of-the Art
- (2016) Brigitte Lamy et al. Frontiers in Microbiology
- Rapid bacterial antibiotic susceptibility test based on simple surface-enhanced Raman spectroscopic biomarkers
- (2016) Chia-Ying Liu et al. Scientific Reports
- Fast and continuous microorganism detection using aptamer-conjugated fluorescent nanoparticles on an optofluidic platform
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- The application of Raman spectroscopy for the detection and identification of microorganisms
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- Raman spectroscopic identification of single bacterial cells under antibiotic influence
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- Rapid detection of single bacteria in unprocessed blood using Integrated Comprehensive Droplet Digital Detection
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- Culture Independent Raman Spectroscopic Identification of Urinary Tract Infection Pathogens: A Proof of Principle Study
- (2013) Sandra Kloß et al. ANALYTICAL CHEMISTRY
- Detecting and Tracking Nosocomial Methicillin-Resistant Staphylococcus aureus Using a Microfluidic SERS Biosensor
- (2013) Xiaonan Lu et al. ANALYTICAL CHEMISTRY
- Impacts of Culture-Independent Diagnostic Practices on Public Health Surveillance for Bacterial Enteric Pathogens
- (2012) Alicia B. Cronquist et al. CLINICAL INFECTIOUS DISEASES
- High-throughput sequencing and clinical microbiology: progress, opportunities and challenges
- (2010) Mark J Pallen et al. CURRENT OPINION IN MICROBIOLOGY
- Shell-isolated nanoparticle-enhanced Raman spectroscopy
- (2010) Jian Feng Li et al. NATURE
- Gaussian mixture discriminant analysis for the single-cell differentiation of bacteria using micro-Raman spectroscopy
- (2009) Ulrike Schmid et al. CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS
- International Study of the Prevalence and Outcomes of Infection in Intensive Care Units
- (2009) Jean-Louis Vincent JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION
- EFNS guideline on the management of community-acquired bacterial meningitis: report of an EFNS Task Force on acute bacterial meningitis in older children and adults
- (2008) A. Chaudhuri et al. EUROPEAN JOURNAL OF NEUROLOGY
- The Arginine Catabolic Mobile Element and Staphylococcal Chromosomal CassettemecLinkage: Convergence of Virulence and Resistance in the USA300 Clone of Methicillin‐ResistantStaphylococcus aureus
- (2008) Binh An Diep et al. JOURNAL OF INFECTIOUS DISEASES
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