Anchored hybrid enrichment challenges the traditional classification of flesh flies (Diptera: Sarcophagidae)

An integrative phylogenomic approach illuminates the evolutionary history of cockroaches and termites (Blattodea)

(2019) Dominic A. Evangelista et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Model selection may not be a mandatory step for phylogeny reconstruction

(2019) Shiran Abadi et al.   Nature Communications

New data, same story: phylogenomics does not support Syrphoidea (Diptera: Syrphidae, Pipunculidae)

(2018) THOMAS PAULI et al.   SYSTEMATIC ENTOMOLOGY

A phylogenomic analysis of Culicomorpha (Diptera) resolves the relationships among the eight constituent families

(2018) SUJATHA NARAYANAN  KUTTY et al.   SYSTEMATIC ENTOMOLOGY

Odd, outsized, and obscure: Sarcophaga (Hadroxena) karakoncolos sp. n. (Diptera: Sarcophagidae) from Turkey

(2018) DANIEL WHITMORE et al.   ZOOTAXA

Anchored phylogenomics unravels the evolution of spider flies (Diptera, Acroceridae) and reveals discordance between nucleotides and amino acids

(2018) Jessica P. Gillung et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Multilocus and multiregional phylogeny reconstruction of the genus Sarcophaga (Diptera, Sarcophagidae)

(2017) Eliana Buenaventura et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Molecular phylogeny of Miltogramminae (Diptera: Sarcophagidae): Implications for classification, systematics and evolution of larval feeding strategies

(2017) Marcin Piwczyński et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Phylogeny, evolution and male terminalia functionality of Sarcophaginae (Diptera: Sarcophagidae)

(2017) Eliana Buenaventura et al.   ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

First description of the first instar larva of Sphecapatoclea and Sphecapatodes (Diptera: Sarcophagidae)

(2017) Krzysztof Szpila et al.   ZOOLOGISCHER ANZEIGER

Traumatic Myiasis: A Neglected Disease in a Changing World

(2016) Martin J.R. Hall et al.   Annual Review of Entomology

Anchored enrichment dataset for true flies (order Diptera) reveals insights into the phylogeny of flower flies (family Syrphidae)

(2016) Andrew Donovan Young et al.   BMC EVOLUTIONARY BIOLOGY

Molecular phylogeny of the hyperdiverse genusSarcophaga(Diptera: Sarcophagidae), and comparison between algorithms for identification of rogue taxa

(2016) Eliana Buenaventura et al.   CLADISTICS

Phylogenetic inference of calyptrates, with the first mitogenomes for Gasterophilinae (Diptera: Oestridae) and Paramacronychiinae (Diptera: Sarcophagidae)

(2016) Dong Zhang et al.   International Journal of Biological Sciences

Implementing and testing the multispecies coalescent model: A valuable paradigm for phylogenomics

(2016) Scott V. Edwards et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Catalog of the Paramacronychiinae of China (Diptera: Sarcophagidae)

(2016) DONG ZHANG et al.   ZOOTAXA

ASTRAL-II: coalescent-based species tree estimation with many hundreds of taxa and thousands of genes

(2015) Siavash Mirarab et al.   BIOINFORMATICS

Phylogeny of the Peckia-genus group: evolution of male genitalia in the major necrophagous guild of Neotropical flesh flies (Diptera: Sarcophagidae)

(2015) Eliana Buenaventura et al.   ORGANISMS DIVERSITY & EVOLUTION

The Challenges of Resolving a Rapid, Recent Radiation: Empirical and Simulated Phylogenomics of Philippine Shrews

(2015) Thomas C. Giarla et al.   SYSTEMATIC BIOLOGY

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

FASconCAT-G: extensive functions for multiple sequence alignment preparations concerning phylogenetic studies

(2014) Patrick Kück et al.   Frontiers in Zoology

Phylogenomics resolves the timing and pattern of insect evolution

(2014) B. Misof et al.   SCIENCE

Signal through the noise? Phylogeny of the Tachinidae (Diptera) as inferred from morphological evidence

(2014) PIERFILIPPO CERRETTI et al.   SYSTEMATIC ENTOMOLOGY

Remarkable Rhinophoridae in a growing generic genealogy (Diptera: Calyptratae, Oestroidea)

(2014) PIERFILIPPO CERRETTI et al.   SYSTEMATIC ENTOMOLOGY

A large-scale molecular phylogeny of flesh flies (Diptera: Sarcophagidae)

(2014) MARCIN PIWCZYŃSKI et al.   SYSTEMATIC ENTOMOLOGY

Male terminalia of Diptera (Insecta): a review of evolutionary trends, homology and phylogenetic implications

(2013) Bradley J. Sinclair et al.   INSECT SYSTEMATICS & EVOLUTION

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

History of tachinid classification (Diptera, Tachinidae)

(2013) James O Hara   ZooKeys

Phylogeny ofHeteronychia: the largest lineage ofSarcophaga(Diptera: Sarcophagidae)

(2013) Daniel Whitmore et al.   ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

More than 1000 ultraconserved elements provide evidence that turtles are the sister group of archosaurs

(2012) N. G. Crawford et al.   Biology Letters

Taxonomy and nomenclature of Eremasiomyia macularis and Miltogramma maroccana (Diptera: Sarcophagidae: Miltogramminae)

(2012) Thomas Pape et al.   CANADIAN ENTOMOLOGIST

Genomic and Morphological Evidence Converge to Resolve the Enigma of Strepsiptera

(2012) Oliver Niehuis et al.   CURRENT BIOLOGY

Ein Fall von Räuberei bei überirdisch nistenden tropischen Termiten (Isoptera: Termitidae) durch zwei Fleischfliegenarten (Diptera: Sarcophagidae)

(2012) Julio Mendez   ENTOMOLOGIA GENERALIS

Phylogenetics and taxonomy of Ventrops - the largest genus of Afrotropical Rhinophoridae (Diptera)

(2012) Pierfilippo Cerretti et al.   INVERTEBRATE SYSTEMATICS

Molecular phylogenetics of Oestroidea (Diptera: Calyptratae) with emphasis on Calliphoridae: Insights into the inter-familial relationships and additional evidence for paraphyly among blowflies

(2012) M.A.T. Marinho et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Anchored Hybrid Enrichment for Massively High-Throughput Phylogenomics

(2012) Alan R. Lemmon et al.   SYSTEMATIC BIOLOGY

Carrion mimicry in a South African orchid: flowers attract a narrow subset of the fly assemblage on animal carcasses

(2011) Timotheüs van der Niet et al.   ANNALS OF BOTANY

On the temporal inconsistencies of Linnean taxonomic ranks

(2011) JOHN C. AVISE et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Phylogeny of Asilidae Inferred from Morphological Characters of Imagines (Insecta: Diptera: Brachycera: Asiloidea)

(2011) TORSTEN DIKOW   BULLETIN OF THE AMERICAN MUSEUM OF NATURAL HISTORY

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Episodic radiations in the fly tree of life

(2011) B. M. Wiegmann et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Parametric and non-parametric masking of randomness in sequence alignments can be improved and leads to better resolved trees

(2010) Patrick Kück et al.   Frontiers in Zoology

Myiasis in the Neotropical Amphibian Hypsiboas beckeri (Anura: Hylidae) by a New Species of Lepidodexia (Diptera: Sarcophagidae)

(2010) Cátia A. de Mello-Patiu et al.   JOURNAL OF PARASITOLOGY

Molecular phylogeny of the Calyptratae (Diptera: Cyclorrhapha) with an emphasis on the superfamily Oestroidea and the position of Mystacinobiidae and McAlpine's fly

(2010) SUJATHA NARAYANAN KUTTY et al.   SYSTEMATIC ENTOMOLOGY

Towards a phylogeny of the flesh flies (Diptera: Sarcophagidae): morphology and phylogenetic implications of the acrophallus in the subfamily Sarcophaginae

(2010) MARJOLAINE GIROUX et al.   ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

A Monte Carlo Approach Successfully Identifies Randomness in Multiple Sequence Alignments : A More Objective Means of Data Exclusion

(2009) Bernhard Misof et al.   SYSTEMATIC BIOLOGY