Tissue Proteome Signatures Associated with Five Grades of Prostate Cancer and Benign Prostatic Hyperplasia

Cancer statistics, 2018

(2018) Rebecca L. Siegel et al.   CA-A CANCER JOURNAL FOR CLINICIANS

Tissue proteomics studies in the investigation of prostate cancer

(2018) Anna Mantsiou et al.   Expert Review of Proteomics

Distinct urinary glycoprotein signatures in prostate cancer patients

(2018) Rebeca Kawahara et al.   Oncotarget

High sensitivity proteomics of prostate cancer tissue microarrays to discriminate between healthy and cancerous tissue

(2018) Lilla Turiák et al.   Journal of Proteomics

The PRIDE database and related tools and resources in 2019: improving support for quantification data

(2018) Yasset Perez-Riverol et al.   NUCLEIC ACIDS RESEARCH

Prostate cancer proteomics: clinically useful protein biomarkers and future perspectives

(2017) Paula Intasqui et al.   Expert Review of Proteomics

Peptide Selection for Targeted Protein Quantitation

(2017) Cristina Chiva et al.   JOURNAL OF PROTEOME RESEARCH

Prostate cancer proteomics: Current trends and future perspectives for biomarker discovery

(2017) Cristiana Pistol Tanase et al.   Oncotarget

Quantitative Mass Spectrometry-Based Proteomic Profiling for Precision Medicine in Prostate Cancer

(2017) Amilcar Flores-Morales et al.   Frontiers in Oncology

Grading of prostatic adenocarcinoma: current state and prognostic implications

(2016) Jennifer Gordetsky et al.   Diagnostic Pathology

The Proteome of Primary Prostate Cancer

(2016) Diego Iglesias-Gato et al.   EUROPEAN UROLOGY

Detection of aggressive prostate cancer associated glycoproteins in urine using glycoproteomics and mass spectrometry

(2016) Xingwang Jia et al.   PROTEOMICS

Clinically Relevant Molecular Subtypes in Leiomyosarcoma

(2015) X. Guo et al.   CLINICAL CANCER RESEARCH

Metastatic Prostate Cancer and the Bone: Significance and Therapeutic Options

(2015) Benjamin A. Gartrell et al.   EUROPEAN UROLOGY

MetaboAnalyst 3.0—making metabolomics more meaningful

(2015) Jianguo Xia et al.   NUCLEIC ACIDS RESEARCH

Cellular Adhesion Promotes Prostate Cancer Cells Escape from Dormancy

(2015) Nazanin Ruppender et al.   PLoS One

Molecular signature induced by RNASET2, a tumor antagonizing gene, in ovarian cancer cells

(2015) Francesco Acquati et al.   Oncotarget

Identification of proteomic biomarkers predicting prostate cancer aggressiveness and lethality despite biopsy-sampling error

(2014) M Shipitsin et al.   BRITISH JOURNAL OF CANCER

Distinct functions of macrophage-derived and cancer cell-derived cathepsin Z combine to promote tumor malignancy via interactions with the extracellular matrix

(2014) Leila Akkari et al.   GENES & DEVELOPMENT

Glycoproteomic Analysis of Prostate Cancer Tissues by SWATH Mass Spectrometry Discovers N-acylethanolamine Acid Amidase and Protein Tyrosine Kinase 7 as Signatures for Tumor Aggressiveness

(2014) Yansheng Liu et al.   MOLECULAR & CELLULAR PROTEOMICS

Accurate Proteome-wide Label-free Quantification by Delayed Normalization and Maximal Peptide Ratio Extraction, Termed MaxLFQ

(2014) Jürgen Cox et al.   MOLECULAR & CELLULAR PROTEOMICS

Prostate cancer cells induce osteoblastic differentiation via semaphorin 3A

(2014) Fuzhou Liu et al.   PROSTATE

Prognostic Gleason grade grouping: data based on the modified Gleason scoring system

(2013) Phillip M. Pierorazio et al.   BJU INTERNATIONAL

APOBEC3B is an enzymatic source of mutation in breast cancer

(2013) Michael B. Burns et al.   NATURE

Evidence for APOBEC3B mutagenesis in multiple human cancers

(2013) Michael B Burns et al.   NATURE GENETICS

Parallel Reaction Monitoring for High Resolution and High Mass Accuracy Quantitative, Targeted Proteomics

(2012) Amelia C. Peterson et al.   MOLECULAR & CELLULAR PROTEOMICS

TACC2 Is an Androgen-Responsive Cell Cycle Regulator Promoting Androgen-Mediated and Castration-Resistant Growth of Prostate Cancer

(2012) Ken-ichi Takayama et al.   MOLECULAR ENDOCRINOLOGY

Beyond PSA: The Next Generation of Prostate Cancer Biomarkers

(2012) J. R. Prensner et al.   Science Translational Medicine

More than 100,000 Detectable Peptide Species Elute in Single Shotgun Proteomics Runs but the Majority is Inaccessible to Data-Dependent LC−MS/MS

(2011) Annette Michalski et al.   JOURNAL OF PROTEOME RESEARCH

Andromeda: A Peptide Search Engine Integrated into the MaxQuant Environment

(2011) Jürgen Cox et al.   JOURNAL OF PROTEOME RESEARCH

Overexpression of Cathepsin Z Contributes to Tumor Metastasis by Inducing Epithelial-Mesenchymal Transition in Hepatocellular Carcinoma

(2011) Jian Wang et al.   PLoS One

Skyline: an open source document editor for creating and analyzing targeted proteomics experiments

(2010) Brendan MacLean et al.   BIOINFORMATICS

A statistical framework for protein quantitation in bottom-up MS-based proteomics

(2009) Yuliya Karpievitch et al.   BIOINFORMATICS

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Mechanisms of bone metastasis in prostate cancer: clinical implications

(2008) Pavlos Msaouel et al.   BEST PRACTICE & RESEARCH CLINICAL ENDOCRINOLOGY & METABOLISM

Histone H1x is highly expressed in human neuroendocrine cells and tumours

(2008) Julia Warneboldt et al.   BMC CANCER

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY