Karst rocky desertification does not erode ectomycorrhizal fungal species richness but alters microbial community structure

The role of long-term mineral and organic fertilisation treatment in changing pathogen and symbiont community composition in soil

(2019) Liina Soonvald et al.   APPLIED SOIL ECOLOGY

Surface erosion and underground leakage of yellow soil on slopes in karst regions of southwest China

(2018) Quanhou Dai et al.   LAND DEGRADATION & DEVELOPMENT

Over twenty years farmland reforestation decreases fungal diversity of soils, but stimulates the return of ectomycorrhizal fungal communities

(2018) Nan Hui et al.   PLANT AND SOIL

Conversion of natural forest results in a significant degradation of soil hydraulic properties in the highlands of Kenya

(2018) S.O. Owuor et al.   SOIL & TILLAGE RESEARCH

Soil biota in boreal urban greenspace: Responses to plant type and age

(2018) G. Francini et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil pH Is the Primary Factor Correlating With Soil Microbiome in Karst Rocky Desertification Regions in the Wushan County, Chongqing, China

(2018) Daihua Qi et al.   Frontiers in Microbiology

Glomalin changes in urban-rural gradients and their possible associations with forest characteristics and soil properties in Harbin City, Northeastern China

(2018) Wenjie Wang et al.   JOURNAL OF ENVIRONMENTAL MANAGEMENT

Environment and host as large-scale controls of ectomycorrhizal fungi

(2018) Sietse van der Linde et al.   NATURE

Structure and function of the global topsoil microbiome

(2018) Mohammad Bahram et al.   NATURE

Soil microbial community responses to forage grass cultivation in degraded karst soils, Southwest China

(2018) Dejun Li et al.   LAND DEGRADATION & DEVELOPMENT

Soil microbial communities are shaped by vegetation type and park age in cities under cold climate

(2017) Nan Hui et al.   ENVIRONMENTAL MICROBIOLOGY

The World Karst Aquifer Mapping project: concept, mapping procedure and map of Europe

(2017) Zhao Chen et al.   HYDROGEOLOGY JOURNAL

Shift in fungal communities and associated enzyme activities along an age gradient of managed Pinus sylvestris stands

(2017) Julia Kyaschenko et al.   ISME Journal

Microbial taxa and functional genes shift in degraded soil with bacterial wilt

(2017) Hongchun Zhang et al.   Scientific Reports

Soil Bacterial Community Structure and Co-occurrence Pattern during Vegetation Restoration in Karst Rocky Desertification Area

(2017) Liang Xue et al.   Frontiers in Microbiology

Urbanization erodes ectomycorrhizal fungal diversity and may cause microbial communities to converge

(2017) Dietrich J. Epp Schmidt et al.   Nature Ecology & Evolution

Bacterial community structure in atrazine treated reforested farmland in Wuying China

(2016) Xinxin Liu et al.   APPLIED SOIL ECOLOGY

Response of soil physical and chemical properties to Rocky desertification succession in South China Karst

(2016) Maoyin Sheng et al.   CARBONATES AND EVAPORITES

Soil microbial community profiles and functional diversity in limestone cedar glades

(2016) Jennifer Cartwright et al.   CATENA

FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild

(2016) Nhu H. Nguyen et al.   Fungal Ecology

Effect of karst rocky desertification on soil fungal communities in Southwest China

(2016) P.C. Wang et al.   GENETICS AND MOLECULAR RESEARCH

Tree species and soil nutrients drive tropical reforestation more than associations with mycorrhizal fungi

(2016) Ellen K. Holste et al.   PLANT AND SOIL

Community structure and dynamics of ectomycorrhizal fungi in a dipterocarp forest fragment and plantation in Thailand

(2016) Nipada Ruankaew Disyatat et al.   Plant Ecology & Diversity

VSEARCH: a versatile open source tool for metagenomics

(2016) Torbjørn Rognes et al.   PeerJ

Plant community richness and microbial interactions structure bacterial communities in soil

(2015) Daniel C. Schlatter et al.   ECOLOGY

Polymerase matters: non-proofreading enzymes inflate fungal community richness estimates by up to 15 %

(2015) Alena K. Oliver et al.   Fungal Ecology

Scraping the bottom of the barrel: are rare high throughput sequences artifacts?

(2015) Shawn P. Brown et al.   Fungal Ecology

Soil restoration with organic amendments: linking cellular functionality and ecosystem processes

(2015) F. Bastida et al.   Scientific Reports

Differential Response of Acidobacteria Subgroups to Forest-to-Pasture Conversion and Their Biogeographic Patterns in the Western Brazilian Amazon

(2015) Acacio A. Navarrete et al.   Frontiers in Microbiology

Rocky desertification in Southwest China: Impacts, causes, and restoration

(2014) Zhongcheng Jiang et al.   EARTH-SCIENCE REVIEWS

Plant diversity predicts beta but not alpha diversity of soil microbes across grasslands worldwide

(2014) Suzanne M. Prober et al.   ECOLOGY LETTERS

Summer temperature increase has distinct effects on the ectomycorrhizal fungal communities of moist tussock and dry tundra in Arctic Alaska

(2014) Luis N. Morgado et al.   GLOBAL CHANGE BIOLOGY

Fungal functioning in a pine forest: evidence from a15N-labeled global change experiment

(2014) Erik A. Hobbie et al.   NEW PHYTOLOGIST

Phosphorus limitation, soil-borne pathogens and the coexistence of plant species in hyperdiverse forests and shrublands

(2014) Etienne Laliberté et al.   NEW PHYTOLOGIST

Multi-Scale Anthropogenic Driving Forces of Karst Rocky Desertification in Southwest China

(2013) X. Yan et al.   LAND DEGRADATION & DEVELOPMENT

Profiling functions of ectomycorrhizal diversity and root structuring in seedlings of Norway spruce (Picea abies) with fast- and slow-growing phenotypes

(2013) Sannakajsa M. Velmala et al.   NEW PHYTOLOGIST

The mycorrhizal-associated nutrient economy: a new framework for predicting carbon-nutrient couplings in temperate forests

(2013) Richard P. Phillips et al.   NEW PHYTOLOGIST

Plant monocultures produce more antagonistic soil Streptomyces communities than high-diversity plant communities

(2013) Matthew G. Bakker et al.   SOIL BIOLOGY & BIOCHEMISTRY

Interactions of vegetation succession, soil bio-chemical properties and microbial communities in a Karst ecosystem

(2012) Hanhua Zhu et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

New primers to amplify the fungal ITS2 region - evaluation by 454-sequencing of artificial and natural communities

(2012) Katarina Ihrmark et al.   FEMS MICROBIOLOGY ECOLOGY

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

(2012) J Gregory Caporaso et al.   ISME Journal

Tropical Soil Bacterial Communities in Malaysia: pH Dominates in the Equatorial Tropics Too

(2012) Binu M. Tripathi et al.   MICROBIAL ECOLOGY

Effects of land use, land cover and rainfall regimes on the surface runoff and soil loss on karst slopes in southwest China

(2011) Tao Peng et al.   CATENA

EcM fungal community structure, but not diversity, altered in a Pb-contaminated shooting range in a boreal coniferous forest site in Southern Finland

(2011) Nan Hui et al.   FEMS MICROBIOLOGY ECOLOGY

Conservation of ectomycorrhizal fungi: exploring the linkages between functional and taxonomic responses to anthropogenic N deposition

(2011) E.A. Lilleskov et al.   Fungal Ecology

Reforestation of burned stands: The effect of ectomycorrhizal fungi on Pinus pinaster establishment

(2011) Nadine R. Sousa et al.   SOIL BIOLOGY & BIOCHEMISTRY

Ironing out the wrinkles in the rare biosphere through improved OTU clustering

(2010) Susan M. Huse et al.   ENVIRONMENTAL MICROBIOLOGY

454 Pyrosequencing and Sanger sequencing of tropical mycorrhizal fungi provide similar results but reveal substantial methodological biases

(2010) Leho Tedersoo et al.   NEW PHYTOLOGIST

The UNITE database for molecular identification of fungi - recent updates and future perspectives

(2010) Kessy Abarenkov et al.   NEW PHYTOLOGIST

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Soil Microbial Communities and Restoration Ecology: Facilitators or Followers?

(2009) J. Harris   SCIENCE

The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems

(2008) Marcel G. A. van der Heijden et al.   ECOLOGY LETTERS

Strong host preference of ectomycorrhizal fungi in a Tasmanian wet sclerophyll forest as revealed by DNA barcoding and taxon-specific primers

(2008) Leho Tedersoo et al.   NEW PHYTOLOGIST

Positive correlation between soil bacterial metabolic and plant species diversity and bacterial and fungal diversity in a vegetation succession on Karst

(2008) Xun-Yang He et al.   PLANT AND SOIL