Sinorhizobium meliloti YbeY is a zinc-dependent single-strand specific endoribonuclease that plays an important role in 16S ribosomal RNA processing

The RNase YbeY is vital for ribosome maturation, stress resistance and virulence of the natural genetic engineer Agrobacterium tumefaciens

(2019) Philip Möller et al.   JOURNAL OF BACTERIOLOGY

Elevated levels of Era GTPase improve growth, 16S rRNA processing, and 70S ribosome assembly of Escherichia coli lacking highly conserved multifunctional YbeY endoribonuclease

(2018) Anubrata Ghosal et al.   JOURNAL OF BACTERIOLOGY

Ribosome maturation by the endoribonuclease YbeY stabilizes a type 3 secretion system transcript required for virulence of enterohemorrhagicEscherichia coli

(2018) Sean P. McAteer et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Characterization of 16S rRNA Processing with Pre-30S Subunit Assembly Intermediates from E. coli

(2018) Brian A. Smith et al.   JOURNAL OF MOLECULAR BIOLOGY

SWISS-MODEL: homology modelling of protein structures and complexes

(2018) Andrew Waterhouse et al.   NUCLEIC ACIDS RESEARCH

In vivo cleavage rules and target repertoire of RNase III in Escherichia coli

(2018) Yael Altuvia et al.   NUCLEIC ACIDS RESEARCH

Expression of Two RpoH Sigma Factors in Sinorhizobium meliloti upon Heat Shock

(2017) Hisayuki Mitsui et al.   MICROBES AND ENVIRONMENTS

The ClusPro web server for protein–protein docking

(2017) Dima Kozakov et al.   Nature Protocols

New additions to the ClusPro server motivated by CAPRI

(2017) Sandor Vajda et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

RNA silencing in plant symbiotic bacteria: Insights from a protein-centric view

(2017) José I. Jiménez-Zurdo et al.   RNA Biology

Molecular Basis of Bacterial Longevity

(2017) Kieran B. Pechter et al.   mBio

Polynucleotide Phosphorylase, RNase E/G, and YbeY Are Involved in the Maturation of 4.5S RNA in Corynebacterium glutamicum

(2016) Tomoya Maeda et al.   JOURNAL OF BACTERIOLOGY

Sinorhizobium meliloti YbeY is an endoribonuclease with unprecedented catalytic features, acting as silencing enzyme in riboregulation

(2016) Margarida Saramago et al.   NUCLEIC ACIDS RESEARCH

ConSurf 2016: an improved methodology to estimate and visualize evolutionary conservation in macromolecules

(2016) Haim Ashkenazy et al.   NUCLEIC ACIDS RESEARCH

Identification of YbeY-Protein Interactions Involved in 16S rRNA Maturation and Stress Regulation in Escherichia coli

(2016) Maarten Vercruysse et al.   mBio

Novel Essential Gene Involved in 16S rRNA Processing in Escherichia coli

(2015) Tatsuaki Kurata et al.   JOURNAL OF MOLECULAR BIOLOGY

Absence of YbeY RNase compromises the growth and enhances the virulence plasmid gene expression of Yersinia enterocolitica O:3

(2015) Katarzyna Leskinen et al.   MICROBIOLOGY-SGM

The Conserved Endoribonuclease YbeY Is Required for Chloroplast Ribosomal RNA Processing in Arabidopsis

(2015) Jinwen Liu et al.   PLANT PHYSIOLOGY

Central role for RNase YbeY in Hfq-dependent and Hfq-independent small-RNA regulation in bacteria

(2014) Shree P Pandey et al.   BMC GENOMICS

The Highly Conserved Bacterial RNase YbeY Is Essential in Vibrio cholerae, Playing a Critical Role in Virulence, Stress Regulation, and RNA Processing

(2014) Maarten Vercruysse et al.   PLoS Pathogens

RNase III: Genetics and Function; Structure and Mechanism

(2013) Donald L. Court et al.   Annual Review of Genetics

Bacterial Mg2+Homeostasis, Transport, and Virulence

(2013) Eduardo A. Groisman et al.   Annual Review of Genetics

Multiple Exoribonucleases Catalyze Maturation of the 3′ Terminus of 16S Ribosomal RNA (rRNA)

(2013) Shaheen Sulthana et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

ZincExplorer: an accurate hybrid method to improve the prediction of zinc-binding sites from protein sequences

(2013) Zhen Chen et al.   Molecular BioSystems

How good is automated protein docking?

(2013) Dima Kozakov et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Dual RpoH Sigma Factors and Transcriptional Plasticity in a Symbiotic Bacterium

(2012) Melanie J. Barnett et al.   JOURNAL OF BACTERIOLOGY

Conserved Bacterial RNase YbeY Plays Key Roles in 70S Ribosome Quality Control and 16S rRNA Maturation

(2012) Asha Ivy Jacob et al.   MOLECULAR CELL

The RNA Chaperone Hfq Independently Coordinates Expression of the VirB Type IV Secretion System and the LuxR-Type Regulator BabR in Brucella abortus 2308

(2011) C. C. Caswell et al.   JOURNAL OF BACTERIOLOGY

A highly conserved protein of unknown function in Sinorhizobium meliloti affects sRNA regulation similar to Hfq

(2011) Shree P. Pandey et al.   NUCLEIC ACIDS RESEARCH

The Era GTPase recognizes the GAUCACCUCC sequence and binds helix 45 near the 3' end of 16S rRNA

(2011) C. Tu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Heat Shock Protein YbeY Is Required for Optimal Activity of the 30S Ribosomal Subunit

(2010) A. Rasouly et al.   JOURNAL OF BACTERIOLOGY

Role of Escherichia coli YbeY, a highly conserved protein, in rRNA processing

(2010) Bryan W. Davies et al.   MOLECULAR MICROBIOLOGY

RNase J is involved in the 5′-end maturation of 16S rRNA and 23S rRNA inSinorhizobium meliloti

(2009) Ramakanth Madhugiri et al.   FEBS LETTERS

YbeY, a Heat Shock Protein Involved in Translation in Escherichia coli

(2009) A. Rasouly et al.   JOURNAL OF BACTERIOLOGY

Structure of ERA in complex with the 3' end of 16S rRNA: Implications for ribosome biogenesis

(2009) C. Tu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA