Assessment of fish communities using environmental DNA: Effect of spatial sampling design in lentic systems of different sizes

Environmental DNA metabarcoding for fish community analysis in backwater lakes: A comparison of capture methods

(2019) Kazuya Fujii et al.   PLoS One

DNA metabarcoding—Need for robust experimental designs to draw sound ecological conclusions

(2019) Lucie Zinger et al.   MOLECULAR ECOLOGY

Using eDNA to biomonitor the fish community in a tropical oligotrophic lake

(2019) Martha Valdez-Moreno et al.   PLoS One

Combined use of eDNA metabarcoding and video surveillance for the assessment of fish biodiversity

(2018) Michal Stat et al.   CONSERVATION BIOLOGY

The choice of universal primers and the characteristics of the species mixture determine when DNA metabarcoding can be quantitative

(2018) Josep Piñol et al.   MOLECULAR ECOLOGY

The effect of filtration method on the efficiency of environmental DNA capture and quantification via metabarcoding

(2018) Jianlong Li et al.   Molecular Ecology Resources

Towards robust and repeatable sampling methods in eDNA-based studies

(2018) Ian A. Dickie et al.   Molecular Ecology Resources

Environmental DNA reveals quantitative patterns of fish biodiversity in large rivers despite its downstream transportation

(2018) Didier Pont et al.   Scientific Reports

Emerging threats and persistent conservation challenges for freshwater biodiversity

(2018) Andrea J. Reid et al.   BIOLOGICAL REVIEWS

Environmental DNA metabarcoding: Transforming how we survey animal and plant communities

(2017) Kristy Deiner et al.   MOLECULAR ECOLOGY

Comparison of American Fisheries Society (AFS) Standard Fish Sampling Techniques and Environmental DNA for Characterizing Fish Communities in a Large Reservoir

(2017) Christina R. Perez et al.   NORTH AMERICAN JOURNAL OF FISHERIES MANAGEMENT

Annual time-series analysis of aqueous eDNA reveals ecologically relevant dynamics of lake ecosystem biodiversity

(2017) Iliana Bista et al.   Nature Communications

Usefulness and limitations of sample pooling for environmental DNA metabarcoding of freshwater fish communities

(2017) Hirotoshi Sato et al.   Scientific Reports

Ecosystem biomonitoring with eDNA: metabarcoding across the tree of life in a tropical marine environment

(2017) Michael Stat et al.   Scientific Reports

Environmental DNA metabarcoding reveals local fish communities in a species-rich coastal sea

(2017) Satoshi Yamamoto et al.   Scientific Reports

Detection of rare and invasive freshwater fish species using eDNA pyrosequencing: Lake Iznik ichthyofauna revised

(2016) Emre Keskin et al.   BIOCHEMICAL SYSTEMATICS AND ECOLOGY

Understanding environmental DNA detection probabilities: A case study using a stream-dwelling char Salvelinus fontinalis

(2016) Taylor M. Wilcox et al.   BIOLOGICAL CONSERVATION

Environmental DNA metabarcoding of lake fish communities reflects long-term data from established survey methods

(2016) Bernd Hänfling et al.   MOLECULAR ECOLOGY

Environmental DNA reveals that rivers are conveyer belts of biodiversity information

(2016) Kristy Deiner et al.   Nature Communications

Spatial Representativeness of Environmental DNA Metabarcoding Signal for Fish Biodiversity Assessment in a Natural Freshwater System

(2016) Raphaël Civade et al.   PLoS One

Environmental DNA – An emerging tool in conservation for monitoring past and present biodiversity

(2015) Philip Francis Thomsen et al.   BIOLOGICAL CONSERVATION

How will the ‘molecular revolution’ contribute to biological recording?

(2015) Lori Lawson Handley   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Assessing vertebrate biodiversity in a kelp forest ecosystem using environmental DNA

(2015) Jesse A. Port et al.   MOLECULAR ECOLOGY

Quantification of mesocosm fish and amphibian species diversity via environmental DNA metabarcoding

(2015) Nathan T. Evans et al.   Molecular Ecology Resources

obitools: aunix-inspired software package for DNA metabarcoding

(2015) Frédéric Boyer et al.   Molecular Ecology Resources

Tag jumps illuminated - reducing sequence-to-sample misidentifications in metabarcoding studies

(2015) Ida Baerholm Schnell et al.   Molecular Ecology Resources

Can DNA-Based Ecosystem Assessments Quantify Species Abundance? Testing Primer Bias and Biomass—Sequence Relationships with an Innovative Metabarcoding Protocol

(2015) Vasco Elbrecht et al.   PLoS One

Transport Distance of Invertebrate Environmental DNA in a Natural River

(2014) Kristy Deiner et al.   PLoS One

Using Environmental DNA to Census Marine Fishes in a Large Mesocosm

(2014) Ryan P. Kelly et al.   PLoS One

The Relationship between the Distribution of Common Carp and Their Environmental DNA in a Small Lake

(2014) Jessica J. Eichmiller et al.   PLoS One

Environmental DNA for wildlife biology and biodiversity monitoring

(2014) Kristine Bohmann et al.   TRENDS IN ECOLOGY & EVOLUTION

Detection of Asian carp DNA as part of a Great Lakes basin-wide surveillance program

(2013) Christopher L. Jerde et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

Essential Biodiversity Variables

(2013) H. M. Pereira et al.   SCIENCE

Site occupancy models in the analysis of environmental DNA presence/absence surveys: a case study of an emerging amphibian pathogen

(2013) Benedikt R. Schmidt et al.   Methods in Ecology and Evolution

Environmental DNA

(2012) PIERRE TABERLET et al.   MOLECULAR ECOLOGY

Monitoring endangered freshwater biodiversity using environmental DNA

(2011) PHILIP FRANCIS THOMSEN et al.   MOLECULAR ECOLOGY

An In silico approach for the evaluation of DNA barcodes

(2010) Gentile Ficetola et al.   BMC GENOMICS

Conservation Status of Imperiled North American Freshwater and Diadromous Fishes

(2010) Howard L. Jelks et al.   FISHERIES

Universal DNA-Based Methods for Assessing the Diet of Grazing Livestock and Wildlife from Feces

(2009) Anthony Pegard et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

The true picture of a lake or reservoir fish stock: A review of needs and progress

(2008) Jan Kubečka et al.   FISHERIES RESEARCH