Cell type–specific actions of Bcl11b in early T-lineage and group 2 innate lymphoid cells

Runx/Cbfβ complexes protect group 2 innate lymphoid cells from exhausted-like hyporesponsiveness during allergic airway inflammation

(2019) Chizuko Miyamoto et al.   Nature Communications

The cis-Regulatory Atlas of the Mouse Immune System

(2019) Hideyuki Yoshida et al.   CELL

Transformation of Accessible Chromatin and 3D Nucleome Underlies Lineage Commitment of Early T Cells

(2018) Gangqing Hu et al.   IMMUNITY

Transcription Factor PU.1 Represses and Activates Gene Expression in Early T Cells by Redirecting Partner Transcription Factor Binding

(2018) Hiroyuki Hosokawa et al.   IMMUNITY

Innate Lymphoid Cell Development: A T Cell Perspective

(2018) Dylan E. Cherrier et al.   IMMUNITY

Peripheral PDGFRα+gp38+mesenchymal cells support the differentiation of fetal liver–derived ILC2

(2018) Satoshi Koga et al.   JOURNAL OF EXPERIMENTAL MEDICINE

Pioneering, chromatin remodeling, and epigenetic constraint in early T-cell gene regulation by SPI1 (PU.1)

(2018) Jonas Ungerbäck et al.   GENOME RESEARCH

Bcl11b sets pro-T cell fate by site-specific cofactor recruitment and by repressing Id2 and Zbtb16

(2018) Hiroyuki Hosokawa et al.   NATURE IMMUNOLOGY

A stochastic epigenetic switch controls the dynamics of T-cell lineage commitment

(2018) Kenneth KH Ng et al.   eLife

Development and differentiation of early innate lymphoid progenitors

(2017) Christelle Harly et al.   JOURNAL OF EXPERIMENTAL MEDICINE

Cutting Edge: Notch Signaling Promotes the Plasticity of Group-2 Innate Lymphoid Cells

(2017) Kangning Zhang et al.   JOURNAL OF IMMUNOLOGY

Downregulation of E Protein Activity Augments an ILC2 Differentiation Program in the Thymus

(2017) Hong-Cheng Wang et al.   JOURNAL OF IMMUNOLOGY

Bcl11b and combinatorial resolution of cell fate in the T-cell gene regulatory network

(2017) William J. R. Longabaugh et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Priming of lineage-specifying genes by Bcl11b is required for lineage choice in post-selection thymocytes

(2017) Satoshi Kojo et al.   Nature Communications

A shared Runx1-bound Zbtb16 enhancer directs innate and innate-like lymphoid lineage development

(2017) Ai-Ping Mao et al.   Nature Communications

Developmental Acquisition of Regulomes Underlies Innate Lymphoid Cell Functionality

(2016) Han-Yu Shih et al.   CELL

Single-cell RNA-seq identifies a PD-1hi ILC progenitor and defines its development pathway

(2016) Yong Yu et al.   NATURE

Asynchronous combinatorial action of four regulatory factors activates Bcl11b for T cell commitment

(2016) Hao Yuan Kueh et al.   NATURE IMMUNOLOGY

Development of innate lymphoid cells

(2016) Erin C Zook et al.   NATURE IMMUNOLOGY

Deciphering the Innate Lymphoid Cell Transcriptional Program

(2016) Cyril Seillet et al.   Cell Reports

Transcriptional Regulation of Innate and Adaptive Lymphocyte Lineages

(2015) Maria Elena De Obaldia et al.   Annual Review of Immunology

Regulation of early T-lineage gene expression and developmental progression by the progenitor cell transcription factor PU.1

(2015) Ameya Champhekar et al.   GENES & DEVELOPMENT

Transcription Factor Bcl11b Controls Identity and Function of Mature Type 2 Innate Lymphoid Cells

(2015) Danielle Califano et al.   IMMUNITY

The transcription factor Bcl11b is specifically expressed in group 2 innate lymphoid cells and is essential for their development

(2015) Yong Yu et al.   JOURNAL OF EXPERIMENTAL MEDICINE

Bcl11b is essential for group 2 innate lymphoid cell development

(2015) Jennifer A. Walker et al.   JOURNAL OF EXPERIMENTAL MEDICINE

Isolation and analysis of group 2 innate lymphoid cells in mice

(2015) Kazuyo Moro et al.   Nature Protocols

The UCSC Genome Browser database: 2016 update

(2015) Matthew L. Speir et al.   NUCLEIC ACIDS RESEARCH

PLZF expression maps the early stages of ILC1 lineage development

(2015) Michael G. Constantinides et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Transcription Factor GATA3 Is Critical for the Development of All IL-7Rα-Expressing Innate Lymphoid Cells

(2014) Ryoji Yagi et al.   IMMUNITY

The Multifaceted Roles of Bcl11b in Thymic and Peripheral T Cells: Impact on Immune Diseases

(2014) Dorina Avram et al.   JOURNAL OF IMMUNOLOGY

Transcription Factor Runx3 Regulates Interleukin-15-Dependent Natural Killer Cell Activation

(2014) D. Levanon et al.   MOLECULAR AND CELLULAR BIOLOGY

Transient Estrogen Receptor Binding and p300 Redistribution Support a Squelching Mechanism for Estradiol-Repressed Genes

(2014) Michael J. Guertin et al.   MOLECULAR ENDOCRINOLOGY

A far downstream enhancer for murine Bcl11b controls its T-cell specific expression

(2013) L. Li et al.   BLOOD

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

Critical roles of Bcl11b in T-cell development and maintenance of T-cell identity

(2010) Pentao Liu et al.   IMMUNOLOGICAL REVIEWS

Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities

(2010) Sven Heinz et al.   MOLECULAR CELL

Reprogramming of T Cells to Natural Killer-Like Cells upon Bcl11b Deletion

(2010) P. Li et al.   SCIENCE

An Early T Cell Lineage Commitment Checkpoint Dependent on the Transcription Factor Bcl11b

(2010) L. Li et al.   SCIENCE

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS