Pseudomonas phragmitis sp. nov., isolated from petroleum polluted river sediment

PGAP-X: extension on pan-genome analysis pipeline

(2018) Yongbing Zhao et al.   BMC GENOMICS

LPSN – List of Prokaryotic names with Standing in Nomenclature (bacterio.net), 20 years on

(2018) Aidan C. Parte   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Proposed minimal standards for the use of genome data for the taxonomy of prokaryotes

(2018) Jongsik Chun et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

ContEst16S: an algorithm that identifies contaminated prokaryotic genomes using 16S RNA gene sequences

(2017) Imchang Lee et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Multilocus sequence analysis (MLSA) in prokaryotic taxonomy

(2015) Stefanie P. Glaeser et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Performance of genetic programming optimised Bowtie2 on genome comparison and analytic testing (GCAT) benchmarks

(2015) W B Langdon   BioData Mining

Phylogenomics and systematics in Pseudomonas

(2015) Margarita Gomila et al.   Frontiers in Microbiology

Pseudomonas matsuisoli sp. nov., isolated from a soil sample

(2014) S.-Y. Lin et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Genome sequence-based species delimitation with confidence intervals and improved distance functions

(2013) Jan P Meier-Kolthoff et al.   BMC BIOINFORMATICS

Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data

(2013) Chen-Shan Chin et al.   NATURE METHODS

Pseudomonas aestusnigri sp. nov., isolated from crude oil-contaminated intertidal sand samples after the Prestige oil spill

(2013) David Sánchez et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Characteristics of an aerobic denitrifier that utilizes ammonium and nitrate simultaneously under the oligotrophic niche

(2012) Liang Zhu et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Taxonomic characterisation of Pseudomonas strain L48 and formal proposal of Pseudomonas entomophila sp. nov.

(2012) Magdalena Mulet et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Pseudomonas composti sp. nov., isolated from compost samples

(2011) A. Gibello et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Pseudomonas litoralis sp. nov., isolated from Mediterranean seawater

(2011) J. Pascual et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

DNA sequence-based analysis of thePseudomonasspecies

(2010) Magdalena Mulet et al.   ENVIRONMENTAL MICROBIOLOGY

Pseudomonas bauzanensis sp. nov., isolated from soil

(2010) D.-C. Zhang et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Heterotrophic nitrification–aerobic denitrification by novel isolated bacteria

(2010) Qian Chen et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

Pseudomonas pelagia sp. nov., isolated from a culture of the Antarctic green alga Pyramimonas gelidicola

(2009) C. Y. Hwang et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Pseudomonas sabulinigri sp. nov., isolated from black beach sand

(2009) K.-H. Kim et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Pseudomonas caeni sp. nov., a denitrifying bacterium isolated from the sludge of an anaerobic ammonium-oxidizing bioreactor

(2009) Y.-P. Xiao et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix

(2009) M. N. Price et al.   MOLECULAR BIOLOGY AND EVOLUTION