Fusion Transcripts of Adjacent Genes: New Insights into the World of Human Complex Transcripts in Cancer

lncINS-IGF2 Promotes Cell Proliferation and Migration by Promoting G1/S Transition in Lung Cancer

(2019) Shenglan Gao et al.   TECHNOLOGY IN CANCER RESEARCH & TREATMENT

The landscape of chimeric RNAs in bladder urothelial carcinoma

(2019) Dingjun Zhu et al.   INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY

Chromosomal Density of Cancer Up-Regulated Genes, Aberrant Enhancer Activity and Cancer Fitness Genes Are Associated with Transcriptional Cis-Effects of Broad Copy Number Gains in Colorectal Cancer

(2019) Daniele Filippo Condorelli et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Chimeric RNAs and their implications in cancer

(2018) Zi Li et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

Novel Intergenically Spliced Chimera, NFATC3-PLA2G15 , Is Associated with Aggressive T-ALL Biology and Outcome

(2018) Jonathan Bond et al.   MOLECULAR CANCER RESEARCH

NFATC3–PLA2G15 Fusion Transcript Identified by RNA Sequencing Promotes Tumor Invasion and Proliferation in Colorectal Cancer Cell Lines

(2018) Jee-Eun Jang et al.   Cancer Research and Treatment

Driver Fusions and Their Implications in the Development and Treatment of Human Cancers

(2018) Qingsong Gao et al.   Cell Reports

Bipolar disorder with binge eating behavior: a genome-wide association study implicates PRR5-ARHGAP8

(2018) Susan L. McElroy et al.   Translational Psychiatry

Transcriptome analysis reveals an altered expression profile of zinc transporters in colorectal cancer

(2018) Vincenza Barresi et al.   JOURNAL OF CELLULAR BIOCHEMISTRY

Positive Caricature Transcriptomic Effects Associated with Broad Genomic Aberrations in Colorectal Cancer

(2018) Daniele F. Condorelli et al.   Scientific Reports

FusionGDB: fusion gene annotation DataBase

(2018) Pora Kim et al.   NUCLEIC ACIDS RESEARCH

A cell-based splicing reporter system to identify regulators of cis-splicing between adjacent genes

(2018) Katarzyna Chwalenia et al.   NUCLEIC ACIDS RESEARCH

The Landscape and Implications of Chimeric RNAs in Cervical Cancer

(2018) Peng Wu et al.   EBioMedicine

It Is Imperative to Establish a Pellucid Definition of Chimeric RNA and to Clear Up a Lot of Confusion in the Relevant Research

(2017) Chengfu Yuan et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

TumorFusions: an integrative resource for cancer-associated transcript fusions

(2017) Xin Hu et al.   NUCLEIC ACIDS RESEARCH

Comparative analysis reveals genomic features of stress-induced transcriptional readthrough

(2017) Anna Vilborg et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Chromosomal instability analysis and regional tumor heterogeneity in colon cancer

(2017) Vincenza Barresi et al.   Cancer Genetics

Novel transcription-induced fusion RNAs in prostate cancer

(2017) Sen Zhao et al.   Oncotarget

Recurrent fusion RNA DUS4L-BCAP29 in non-cancer human tissues and cells

(2017) Yue Tang et al.   Oncotarget

Chimeric RNAs in cancer and normal physiology

(2017) Katarzyna Chwalenia et al.   Wiley Interdisciplinary Reviews-RNA

Connections between Transcription Downstream of Genes and cis-SAGe Chimeric RNA

(2017) Katarzyna Chwalenia et al.   Genes

Absence of Correlation between Chimeric RNA and Aging

(2017) Reyna Huang et al.   Genes

Abundant and broad expression of transcription-induced chimeras and protein products in mammalian genomes

(2016) Guanting Lu et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

ChiTaRS-3.1—the enhanced chimeric transcripts and RNA-seq database matched with protein–protein interactions

(2016) Alessandro Gorohovski et al.   NUCLEIC ACIDS RESEARCH

Recurrent chimeric fusion RNAs in non-cancer tissues and cells

(2016) Mihaela Babiceanu et al.   NUCLEIC ACIDS RESEARCH

Role of CTCF in Regulating SLC45A3-ELK4 Chimeric RNA

(2016) Fujun Qin et al.   PLoS One

A critical look at the function of the P2Y11 receptor

(2016) Karin Dreisig et al.   Purinergic Signalling

Regulation of miR-200c/141 expression by intergenic DNA-looping and transcriptional read-through

(2016) Luciana Batista et al.   Nature Communications

Read-through transcripts in normal human lung parenchyma are down-regulated in lung adenocarcinoma

(2016) Giulia Pintarelli et al.   Oncotarget

Identifying fusion transcripts using next generation sequencing

(2016) Shailesh Kumar et al.   Wiley Interdisciplinary Reviews-RNA

Overexpression of KLHL23 protein from read-through transcription ofPHOSPHO2-KLHL23in gastric cancer increases cell proliferation

(2016) Eun-Seok Choi et al.   FEBS Open Bio

Transcriptome analysis of copper homeostasis genes reveals coordinated upregulation ofSLC31A1,SCO1, andCOX11in colorectal cancer

(2016) Vincenza Barresi et al.   FEBS Open Bio

Functional characterization of BC039389-GATM and KLK4-KRSP1 chimeric read-through transcripts which are up-regulated in renal cell cancer

(2015) Dorothee Pflueger et al.   BMC GENOMICS

Widespread Inducible Transcription Downstream of Human Genes

(2015) Anna Vilborg et al.   MOLECULAR CELL

Integrated genomic analyses identify frequent gene fusion events and VHL inactivation in gastrointestinal stromal tumors

(2015) Guhyun Kang et al.   Oncotarget

Pervasive transcription read-through promotes aberrant expression of oncogenes and RNA chimeras in renal carcinoma

(2015) Ana R Grosso et al.   eLife

Recurrent read-through fusion transcripts in breast cancer

(2014) Katherine E. Varley et al.   BREAST CANCER RESEARCH AND TREATMENT

Identification of chimeric TSNAX–DISC1 resulting from intergenic splicing in endometrial carcinoma through high-throughput RNA sequencing

(2014) Na Li et al.   CARCINOGENESIS

Chimeric RNAs generated by intergenic splicing in normal and cancer cells

(2014) Kasey Jividen et al.   GENES CHROMOSOMES & CANCER

The landscape and therapeutic relevance of cancer-associated transcript fusions

(2014) K Yoshihara et al.   ONCOGENE

Tandem RNA Chimeras Contribute to Transcriptome Diversity in Human Population and Are Associated with Intronic Genetic Variants

(2014) Liliana Greger et al.   PLoS One

Whole-genome integrative analysis reveals expression signatures predicting transformation in follicular lymphoma

(2013) M. Brodtkorb et al.   BLOOD

Mammalian 5′-Capped MicroRNA Precursors that Generate a Single MicroRNA

(2013) Mingyi Xie et al.   CELL

Novel fusion transcripts in human gastric cancer revealed by transcriptome analysis

(2013) H-P Kim et al.   ONCOGENE

Novel mechanism of conjoined gene formation in the human genome

(2012) Ryong Nam Kim et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

New Fusion Transcripts Identified in Normal Karyotype Acute Myeloid Leukemia

(2012) Hongxiu Wen et al.   PLoS One

SLC45A3-ELK4 Chimera in Prostate Cancer: Spotlight on cis -Splicing: Figure 1.

(2012) Chandan Kumar-Sinha et al.   Cancer Discovery

Chimeric Transcript Generated by cis-Splicing of Adjacent Genes Regulates Prostate Cancer Cell Proliferation

(2012) Yanmei Zhang et al.   Cancer Discovery

Deep RNA sequencing analysis of readthrough gene fusions in human prostate adenocarcinoma and reference samples

(2011) Serban Nacu et al.   BMC Medical Genomics

dbCRID: a database of chromosomal rearrangements in human diseases

(2010) F. Kong et al.   NUCLEIC ACIDS RESEARCH

Expression of Conjoined Genes: Another Mechanism for Gene Regulation in Eukaryotes

(2010) Tulika Prakash et al.   PLoS One

SLC45A3-ELK4 Is a Novel and Frequent Erythroblast Transformation-Specific Fusion Transcript in Prostate Cancer

(2009) D. S. Rickman et al.   CANCER RESEARCH

Transcriptome sequencing to detect gene fusions in cancer

(2009) Christopher A. Maher et al.   NATURE

Short Homologous Sequences Are Strongly Associated with the Generation of Chimeric RNAs in Eukaryotes

(2008) Xin Li et al.   JOURNAL OF MOLECULAR EVOLUTION