Topology, divergence dates, and macroevolutionary inferences vary between different tip-dating approaches applied to fossil theropods (Dinosauria)

Which came first: The lizard or the egg? Robustness in phylogenetic reconstruction of ancestral states

(2015) April M. Wright et al.   JOURNAL OF EXPERIMENTAL ZOOLOGY PART B-MOLECULAR AND DEVELOPMENTAL EVOLUTION

Total-Evidence Dating under the Fossilized Birth–Death Process

(2015) Chi Zhang et al.   SYSTEMATIC BIOLOGY

Modeling Character Change Heterogeneity in Phylogenetic Analyses of Morphology through the Use of Priors

(2015) April M. Wright et al.   SYSTEMATIC BIOLOGY

Dating Tips for Divergence-Time Estimation

(2015) Joseph E. O’Reilly et al.   TRENDS IN GENETICS

geiger v2.0: an expanded suite of methods for fitting macroevolutionary models to phylogenetic trees

(2014) Matthew W. Pennell et al.   BIOINFORMATICS

Assessing the effect of time-scaling methods on phylogeny-based analyses in the fossil record

(2014) David W. Bapst   PALEOBIOLOGY

The fossilized birth-death process for coherent calibration of divergence-time estimates

(2014) T. A. Heath et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rates of Dinosaur Body Mass Evolution Indicate 170 Million Years of Sustained Ecological Innovation on the Avian Stem Lineage

(2014) Roger B. J. Benson et al.   PLOS BIOLOGY

Bayesian Inference of Sampled Ancestor Trees for Epidemiology and Fossil Calibration

(2014) Alexandra Gavryushkina et al.   PLoS Computational Biology

Efficacy or convenience? Model-based approaches to phylogeny estimation using morphological data

(2013) Marc R. Spencer et al.   CLADISTICS

Archaeopteryx, paravian phylogenetic analyses, and the use of probability-based methods for palaeontological datasets

(2013) Xing Xu et al.   JOURNAL OF SYSTEMATIC PALAEONTOLOGY

Dating Phylogenies with Sequentially Sampled Tips

(2013) Tanja Stadler et al.   SYSTEMATIC BIOLOGY

Robust Regression and Posterior Predictive Simulation Increase Power to Detect Early Bursts of Trait Evolution

(2013) Graham J. Slater et al.   SYSTEMATIC BIOLOGY

A stochastic rate-calibrated method for time-scaling phylogenies of fossil taxa

(2013) David W. Bapst   Methods in Ecology and Evolution

A Review of Dromaeosaurid Systematics and Paravian Phylogeny

(2012) Alan H. Turner et al.   BULLETIN OF THE AMERICAN MUSEUM OF NATURAL HISTORY

A Total-Evidence Approach to Dating with Fossils, Applied to the Early Radiation of the Hymenoptera

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Likelihood reinstates Archaeopteryx as a primitive bird

(2011) M. S. Y. Lee et al.   Biology Letters

An Archaeopteryx-like theropod from China and the origin of Avialae

(2011) Xing Xu et al.   NATURE

Divergence Time Estimation Using Fossils as Terminal Taxa and the Origins of Lissamphibia

(2011) R. Alexander Pyron   SYSTEMATIC BIOLOGY

Sampling-through-time in birth–death trees

(2010) Tanja Stadler   JOURNAL OF THEORETICAL BIOLOGY

Stratocladistics: Integrating Temporal Data and Character Data in Phylogenetic Inference

(2008) Daniel C. Fisher   Annual Review of Ecology Evolution and Systematics