Deep learning for drug–drug interaction extraction from the literature: a review

Evaluation of pooling operations in convolutional architectures for drug-drug interaction extraction

(2018) Víctor Suárez-Paniagua et al.   BMC BIOINFORMATICS

Leveraging Biomedical Resources in Bi-LSTM for Drug-Drug Interaction Extraction

(2018) Bo Xu et al.   IEEE Access

Relation Extraction Using Distant Supervision

(2018) Alisa Smirnova et al.   ACM COMPUTING SURVEYS

Knowledge Graph Embedding: A Survey of Approaches and Applications

(2017) Quan Wang et al.   IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING

Drug–drug interaction extraction from biomedical literature using support vector machine and long short term memory networks

(2017) Degen Huang et al.   INFORMATION SCIENCES

Drug drug interaction extraction from biomedical literature using syntax convolutional neural network

(2016) Zhehuan Zhao et al.   BIOINFORMATICS

Coupling Data Mining and Laboratory Experiments to Discover Drug Interactions Causing QT Prolongation

(2016) Tal Lorberbaum et al.   JOURNAL OF THE AMERICAN COLLEGE OF CARDIOLOGY

Mining biomedical images towards valuable information retrieval in biomedical and life sciences

(2016) Zeeshan Ahmed et al.   Database-The Journal of Biological Databases and Curation

Deep convolutional neural networks for annotating gene expression patterns in the mouse brain

(2015) Tao Zeng et al.   BMC BIOINFORMATICS

Describing Multimedia Content Using Attention-Based Encoder-Decoder Networks

(2015) Kyunghyun Cho et al.   IEEE TRANSACTIONS ON MULTIMEDIA

Extracting drug–drug interactions from literature using a rich feature-based linear kernel approach

(2015) Sun Kim et al.   JOURNAL OF BIOMEDICAL INFORMATICS

Pharmacovigilance from social media: mining adverse drug reaction mentions using sequence labeling with word embedding cluster features

(2015) A. Nikfarjam et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

Deep learning

(2015) Yann LeCun et al.   NATURE

Predicting Pharmacodynamic Drug-Drug Interactions through Signaling Propagation Interference on Protein-Protein Interaction Networks

(2015) Kyunghyun Park et al.   PLoS One

A novel feature-based approach to extract drug-drug interactions from biomedical text

(2014) Q.-C. Bui et al.   BIOINFORMATICS

State of the Art and Development of a Drug-Drug Interaction Large Scale Predictor Based on 3D Pharmacophoric Similarity

(2014) Santiago Vilar et al.   CURRENT DRUG METABOLISM

Drug-drug interaction software in clinical practice: a systematic review

(2014) Tina Roblek et al.   EUROPEAN JOURNAL OF CLINICAL PHARMACOLOGY

Data mining for potential adverse drug–drug interactions

(2014) Felix Hammann et al.   Expert Opinion on Drug Metabolism & Toxicology

Convolutional Neural Networks for Speech Recognition

(2014) Ossama Abdel-Hamid et al.   IEEE-ACM Transactions on Audio Speech and Language Processing

Machine Learning Paradigms for Speech Recognition: An Overview

(2013) Li Deng et al.   IEEE Transactions on Audio Speech and Language Processing

The DDI corpus: An annotated corpus with pharmacological substances and drug–drug interactions

(2013) María Herrero-Zazo et al.   JOURNAL OF BIOMEDICAL INFORMATICS

DrugBank 4.0: shedding new light on drug metabolism

(2013) Vivian Law et al.   NUCLEIC ACIDS RESEARCH

Informatics confronts drug–drug interactions

(2013) Bethany Percha et al.   TRENDS IN PHARMACOLOGICAL SCIENCES

Data-Driven Prediction of Drug Effects and Interactions

(2012) N. P. Tatonetti et al.   Science Translational Medicine

Predicting Drug–Drug Interactions: An FDA Perspective

(2009) Lei Zhang et al.   AAPS Journal

Tree kernel-based semantic relation extraction with rich syntactic and semantic information

(2009) Guodong Zhou et al.   INFORMATION SCIENCES

In Vitro Evaluation of Reversible and Irreversible Cytochrome P450 Inhibition: Current Status on Methodologies and their Utility for Predicting Drug–Drug Interactions

(2008) Stephen Fowler et al.   AAPS Journal

Feature Forest Models for Probabilistic HPSG Parsing

(2008) Yusuke Miyao et al.   COMPUTATIONAL LINGUISTICS

Exposure of the elderly to potential nephrotoxic drug combinations in Belgium

(2008) Hilde LE Smets et al.   PHARMACOEPIDEMIOLOGY AND DRUG SAFETY