Identification of microRNAs involved in chilling response of maize by high-throughput sequencing

Differential regulation of microRNAs in response to osmotic, salt and cold stresses in wheat

(2014) Om Prakash Gupta et al.   MOLECULAR BIOLOGY REPORTS

Combined small RNA and degradome sequencing reveals novel miRNAs and their targets in response to low nitrate availability in maize

(2013) Yongping Zhao et al.   ANNALS OF BOTANY

Amyloplast-Localized SUBSTANDARD STARCH GRAIN4 Protein Influences the Size of Starch Grains in Rice Endosperm

(2013) R. Matsushima et al.   PLANT PHYSIOLOGY

Identification and comparative analysis of low phosphate tolerance-associated microRNAs in two maize genotypes

(2013) Laming Pei et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Differential Expression of MicroRNAs in Response to Drought Stress in Maize

(2013) Jing-sheng LI et al.   Journal of Integrative Agriculture

Characterization of microRNAs expression during maize seed development

(2012) Mingming Kang et al.   BMC GENOMICS

Cloning and characterization of miRNAs from maize seedling roots under low phosphorus stress

(2012) Zhiming Zhang et al.   MOLECULAR BIOLOGY REPORTS

Complexes with Mixed Primary and Secondary Cellulose Synthases Are Functional in Arabidopsis Plants

(2012) A. Carroll et al.   PLANT PHYSIOLOGY

Cloning and Characterization of Maize miRNAs Involved in Responses to Nitrogen Deficiency

(2012) Meng Zhao et al.   PLoS One

Genome-wide identification of cold-responsive and new microRNAs in Populus tomentosa by high-throughput sequencing

(2011) Lei Chen et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Proteomic analyses of apoplastic proteins from germinating Arabidopsis thaliana pollen

(2011) Weina Ge et al.   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

Identification and characterization of maize microRNAs involved in the very early stage of seed germination

(2011) Liwen Wang et al.   BMC GENOMICS

DOLICHOL PHOSPHATE MANNOSE SYNTHASE1 Mediates the Biogenesis of Isoprenyl-Linked Glycans and Influences Development, Stress Response, and Ammonium Hypersensitivity inArabidopsis

(2011) Nurul Jadid et al.   PLANT CELL

Expression and tissue-specific localization of nitrate-responsive miRNAs in roots of maize seedlings

(2011) SARA TREVISAN et al.   PLANT CELL AND ENVIRONMENT

Genome-Wide Identification of MicroRNAs in Response to Low Nitrate Availability in Maize Leaves and Roots

(2011) Zhenhua Xu et al.   PLoS One

The Locus Lookup tool at MaizeGDB: identification of genomic regions in maize by integrating sequence information with physical and genetic maps

(2010) C. M. Andorf et al.   BIOINFORMATICS

Analysis of microRNA transcriptome by deep sequencing of small RNA libraries of peripheral blood

(2010) Candida Vaz et al.   BMC GENOMICS

The maize SBP-box transcription factor encoded by tasselsheath4 regulates bract development and the establishment of meristem boundaries

(2010) G. Chuck et al.   DEVELOPMENT

Profiling of cold-stress-responsive miRNAs in rice by microarrays

(2010) De-Kang Lv et al.   GENE

A sensitive non-radioactive northern blot method to detect small RNAs

(2010) Sang Woo Kim et al.   NUCLEIC ACIDS RESEARCH

agriGO: a GO analysis toolkit for the agricultural community

(2010) Zhou Du et al.   NUCLEIC ACIDS RESEARCH

Deep sequencing of Brachypodium small RNAs at the global genome level identifies microRNAs involved in cold stress response

(2009) Jingyu Zhang et al.   BMC GENOMICS

RNA-mediated chromatin-based silencing in plants

(2009) Marjori Matzke et al.   CURRENT OPINION IN CELL BIOLOGY

UV-B-responsive microRNAs in Populus tremula

(2009) Xiaoyun Jia et al.   JOURNAL OF PLANT PHYSIOLOGY

Copper homeostasis

(2009) Jason L. Burkhead et al.   NEW PHYTOLOGIST

Ectopic expression of miR396 suppressesGRFtarget gene expression and alters leaf growth inArabidopsis

(2009) Dongmei Liu et al.   PHYSIOLOGIA PLANTARUM

Small RNA Deep Sequencing Reveals Role for Arabidopsis thaliana RNA-Dependent RNA Polymerases in Viral siRNA Biogenesis

(2009) Xiaopeng Qi et al.   PLoS One

A Genome-Wide Characterization of MicroRNA Genes in Maize

(2009) Lifang Zhang et al.   PLoS Genetics

Identification and characterization of novel amphioxus microRNAs by Solexa sequencing

(2009) Xi Chen et al.   GENOME BIOLOGY

Differential expression of miRNAs in response to salt stress in maize roots

(2008) Dong Ding et al.   ANNALS OF BOTANY

Identification of cold-inducible microRNAs in plants by transcriptome analysis

(2008) X ZHOU et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

SOAP: short oligonucleotide alignment program

(2008) R. Li et al.   BIOINFORMATICS

Microarray-based analysis of stress-regulated microRNAs in Arabidopsis thaliana

(2008) H.-H. Liu et al.   RNA