Exploring effective approaches for haplotype block phasing

Strategies for phasing and imputation in a population isolate

(2018) Anthony Francis Herzig et al.   GENETIC EPIDEMIOLOGY

A comparison of different algorithms for phasing haplotypes using Holstein cattle genotypes and pedigree data

(2017) Younes Miar et al.   JOURNAL OF DAIRY SCIENCE

Haplotype-based interaction of the PPARGC1A and UCP1 genes is associated with impaired fasting glucose or type 2 diabetes mellitus

(2017) Xiaoting Pei et al.   MEDICINE

Genome-wide haplotype-based association analysis of major depressive disorder in Generation Scotland and UK Biobank

(2017) David M. Howard et al.   Translational Psychiatry

Reference-based phasing using the Haplotype Reference Consortium panel

(2016) Po-Ru Loh et al.   NATURE GENETICS

Fast and accurate long-range phasing in a UK Biobank cohort

(2016) Po-Ru Loh et al.   NATURE GENETICS

Haplotype estimation for biobank-scale data sets

(2016) Jared O'Connell et al.   NATURE GENETICS

The new NHGRI-EBI Catalog of published genome-wide association studies (GWAS Catalog)

(2016) Jacqueline MacArthur et al.   NUCLEIC ACIDS RESEARCH

Genome-wide haplotype association study identify TNFRSF1A, CASP7, LRP1B, CDH1 and TG genes associated with Alzheimer’s disease in Caribbean Hispanic individuals

(2015) Zhenwei Shang et al.   Oncotarget

Genome-Wide Association Studies Using Haplotypes and Individual SNPs in Simmental Cattle

(2014) Yang Wu et al.   PLoS One

Combined genotype and haplotype tests for region-based association studies

(2013) Sergii Zakharov et al.   BMC GENOMICS

Genome-Wide Haplotype Analysis of Cis Expression Quantitative Trait Loci in Monocytes

(2013) Sophie Garnier et al.   PLoS Genetics

Phasing of Many Thousands of Genotyped Samples

(2012) Amy L. Williams et al.   AMERICAN JOURNAL OF HUMAN GENETICS

A linear complexity phasing method for thousands of genomes

(2011) Olivier Delaneau et al.   NATURE METHODS

The importance of phase information for human genomics

(2011) Ryan Tewhey et al.   NATURE REVIEWS GENETICS

Haplotype phasing: existing methods and new developments

(2011) Sharon R. Browning et al.   NATURE REVIEWS GENETICS

Haplotype Analysis Improved Evidence for Candidate Genes for Intramuscular Fat Percentage from a Genome Wide Association Study of Cattle

(2011) William Barendse   PLoS One

MaCH: using sequence and genotype data to estimate haplotypes and unobserved genotypes

(2010) Yun Li et al.   GENETIC EPIDEMIOLOGY

Integrating common and rare genetic variation in diverse human populations

(2010)   NATURE

Multiple common variants for celiac disease influencing immune gene expression

(2010) Patrick C A Dubois et al.   NATURE GENETICS

Integrated Genetic and Epigenetic Analysis Identifies Haplotype-Specific Methylation in the FTO Type 2 Diabetes and Obesity Susceptibility Locus

(2010) Christopher G. Bell et al.   PLoS One

A Flexible and Accurate Genotype Imputation Method for the Next Generation of Genome-Wide Association Studies

(2009) Bryan N. Howie et al.   PLoS Genetics

Gains in power for exhaustive analyses of haplotypes using variable-sized sliding window strategy: a comparison of association-mapping strategies

(2008) Yanfang Guo et al.   EUROPEAN JOURNAL OF HUMAN GENETICS