BoostGAPFILL: improving the fidelity of metabolic network reconstructions through integrated constraint and pattern-based methods

BiGG Models: A platform for integrating, standardizing and sharing genome-scale models

(2015) Zachary A. King et al.   NUCLEIC ACIDS RESEARCH

fastGapFill: efficient gap filling in metabolic networks

(2014) Ines Thiele et al.   BIOINFORMATICS

Constraint-based models predict metabolic and associated cellular functions

(2014) Aarash Bordbar et al.   NATURE REVIEWS GENETICS

Predicting network functions with nested patterns

(2014) Mathias Ganter et al.   Nature Communications

Construction and completion of flux balance models from pathway databases

(2012) Mario Latendresse et al.   BIOINFORMATICS

Systematizing the generation of missing metabolic knowledge

(2010) Jeffrey D. Orth et al.   BIOTECHNOLOGY AND BIOENGINEERING

Matrix Factorization Techniques for Recommender Systems

(2009) Yehuda Koren et al.   COMPUTER