AltORFev facilitates the prediction of alternative open reading frames in eukaryotic mRNAs

Estimation of ribosome profiling performance and reproducibility at various levels of resolution

(2016) Alon Diament et al.   Biology Direct

Ribosome Footprint Profiling of Translation throughout the Genome

(2016) Nicholas T. Ingolia   CELL

RiboGalaxy: A browser based platform for the alignment, analysis and visualization of ribosome profiling data

(2016) Audrey M. Michel et al.   RNA Biology

RiboTools: a Galaxy toolbox for qualitative ribosome profiling analysis

(2015) Rachel Legendre et al.   BIOINFORMATICS

Integrative analysis of RNA, translation, and protein levels reveals distinct regulatory variation across humans

(2015) Can Cenik et al.   GENOME RESEARCH

Death of a dogma: eukaryotic mRNAs can code for more than one protein

(2015) Hélène Mouilleron et al.   NUCLEIC ACIDS RESEARCH

RPFdb: a database for genome wide information of translated mRNA generated from ribosome profiling

(2015) Shang-Qian Xie et al.   NUCLEIC ACIDS RESEARCH

Translational regulation shapes the molecular landscape of complex disease phenotypes

(2015) Sebastian Schafer et al.   Nature Communications

Emerging evidence for functional peptides encoded by short open reading frames

(2014) Shea J. Andrews et al.   NATURE REVIEWS GENETICS

PROTEOFORMER: deep proteome coverage through ribosome profiling and MS integration

(2014) Jeroen Crappé et al.   NUCLEIC ACIDS RESEARCH

BioJava: an open-source framework for bioinformatics in 2012

(2012) A. Prlic et al.   BIOINFORMATICS

Interrelations between the Nucleotide Context of Human Start AUG Codon, N-end Amino Acids of the Encoded Protein and Initiation of Translation

(2012) Oxana A. Volkova et al.   JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS

Extensive Translatome Remodeling during ER Stress Response in Mammalian Cells

(2012) Iván Ventoso et al.   PLoS One

The mechanism of eukaryotic translation initiation and principles of its regulation

(2010) Richard J. Jackson et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY