Sorgoleone release from sorghum roots shapes the composition of nitrifying populations, total bacteria, and archaea and determines the level of nitrification

p-Coumaric can alter the composition of cucumber rhizosphere microbial communities and induce negative plant-microbial interactions

(2018) Xingang Zhou et al.   BIOLOGY AND FERTILITY OF SOILS

Distinct distribution patterns of ammonia-oxidizing archaea and bacteria in sediment and water column of the Yellow River estuary

(2018) Mingcong Li et al.   Scientific Reports

Bioturbation as a key driver behind the dominance of Bacteria over Archaea in near-surface sediment

(2017) Xihan Chen et al.   Scientific Reports

Diversity, abundance and activity of ammonia-oxidizing microorganisms in fine particulate matter

(2016) Jing-Feng Gao et al.   Scientific Reports

Community Composition and Abundance of Bacterial, Archaeal and Nitrifying Populations in Savanna Soils on Contrasting Bedrock Material in Kruger National Park, South Africa

(2016) Saskia Rughöft et al.   Frontiers in Microbiology

Minor revision to V4 region SSU rRNA 806R gene primer greatly increases detection of SAR11 bacterioplankton

(2015) A Apprill et al.   AQUATIC MICROBIAL ECOLOGY

Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time series and global field samples

(2015) Alma E. Parada et al.   ENVIRONMENTAL MICROBIOLOGY

Suppression of soil nitrification by plants

(2015) Guntur Venkata Subbarao et al.   PLANT SCIENCE

Consistent responses of soil microbial communities to elevated nutrient inputs in grasslands across the globe

(2015) Jonathan W. Leff et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evaluation of revised polymerase chain reaction primers for more inclusive quantification of ammonia-oxidizing archaea and bacteria

(2015) Kelley A. Meinhardt et al.   Environmental Microbiology Reports

Archaeal Ammonia Oxidizers Dominate in Numbers, but Bacteria Drive Gross Nitrification in N-amended Grassland Soil

(2015) Anna E. Sterngren et al.   Frontiers in Microbiology

Enhanced efficiency fertilisers: a review of formulation and nutrient release patterns

(2014) Yakindra Prasad Timilsena et al.   JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE

Biological nitrification inhibition in sorghum: the role of sorgoleone production

(2014) Tsehaye Tesfamariam et al.   PLANT AND SOIL

Predominance of ammonia-oxidizing archaea and nirK-gene-bearing denitrifiers among ammonia-oxidizing and denitrifying populations in sediments of a large urban eutrophic lake (Lake Donghu)

(2013) Jie Hou et al.   CANADIAN JOURNAL OF MICROBIOLOGY

Multi-factorial drivers of ammonia oxidizer communities: evidence from a national soil survey

(2013) Huaiying Yao et al.   ENVIRONMENTAL MICROBIOLOGY

Grass gets greener

(2013) Nicola Jones   NATURE

Predominance of thaumarchaeal ammonia oxidizer abundance and transcriptional activity in an acidic fen

(2012) Martina Herrmann et al.   ENVIRONMENTAL MICROBIOLOGY

Effect of methyl 3-4-hydroxyphenyl propionate, a Sorghum root exudate, on N dynamic, potential nitrification activity and abundance of ammonia-oxidizing bacteria and archaea

(2012) Pierfrancesco Nardi et al.   PLANT AND SOIL

Biological nitrification inhibition (BNI) activity in sorghum and its characterization

(2012) G. V. Subbarao et al.   PLANT AND SOIL

Archaeal and bacterial ammonia-oxidisers in soil: the quest for niche specialisation and differentiation

(2012) James I. Prosser et al.   TRENDS IN MICROBIOLOGY

Links between Ammonia Oxidizer Community Structure, Abundance, and Nitrification Potential in Acidic Soils

(2011) Huaiying Yao et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Diversity and quantity of ammonia-oxidizing Archaea and Bacteria in sediment of the Pearl River Estuary, China

(2011) Tao Jin et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

The Thaumarchaeota: an emerging view of their phylogeny and ecophysiology

(2011) Michael Pester et al.   CURRENT OPINION IN MICROBIOLOGY

Genomic content of uncultured Bacteroidetes from contrasting oceanic provinces in the North Atlantic Ocean

(2011) Paola R. Gómez-Pereira et al.   ENVIRONMENTAL MICROBIOLOGY

Ammonia-oxidizing archaea have more important role than ammonia-oxidizing bacteria in ammonia oxidation of strongly acidic soils

(2011) Li-Mei Zhang et al.   ISME Journal

Quantitative Analyses of Ammonia-oxidizing Archaea (AOA) and Ammonia-oxidizing Bacteria (AOB) in Fields with Different Soil Types

(2011) Sho Morimoto et al.   MICROBES AND ENVIRONMENTS

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Archaea rather than bacteria control nitrification in two agricultural acidic soils

(2010) Cécile Gubry-Rangin et al.   FEMS MICROBIOLOGY ECOLOGY

Examining the global distribution of dominant archaeal populations in soil

(2010) Scott T Bates et al.   ISME Journal

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Sorgoleone

(2010) Franck E. Dayan et al.   PHYTOCHEMISTRY

Various players in the nitrogen cycle: Diversity and functions of the microorganisms involved in nitrification and denitrification

(2010) Masahito Hayatsu et al.   SOIL SCIENCE AND PLANT NUTRITION

Bacteriarather thanArchaeadominate microbial ammonia oxidation in an agricultural soil

(2009) Zhongjun Jia et al.   ENVIRONMENTAL MICROBIOLOGY

Soil pH regulates the abundance and diversity of Group 1.1c Crenarchaeota

(2009) Laura E. Lehtovirta et al.   FEMS MICROBIOLOGY ECOLOGY

Growth of ammonia-oxidizing archaea in soil microcosms is inhibited by acetylene

(2009) Pierre Offre et al.   FEMS MICROBIOLOGY ECOLOGY

Archaea in dry soil environments

(2009) Sari Timonen et al.   PHYTOCHEMISTRY REVIEWS

On the fate of anthropogenic nitrogen

(2009) W. H. Schlesinger   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evidence for biological nitrification inhibition in Brachiaria pastures

(2009) G. V. Subbarao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Detection, isolation and characterization of a root-exuded compound, methyl 3-(4-hydroxyphenyl) propionate, responsible for biological nitrification inhibition by sorghum (Sorghum bicolor)

(2008) Hossain A. K. M. Zakir et al.   NEW PHYTOLOGIST