flowAI: automatic and interactive anomaly discerning tools for flow cytometry data

FloReMi: Flow density survival regression using minimal feature redundancy

(2015) Sofie Van Gassen et al.   CYTOMETRY PART A

changepoint: AnRPackage for Changepoint Analysis

(2015) Rebecca Killick et al.   Journal of Statistical Software

High-dimensional analysis of the murine myeloid cell system

(2014) Burkhard Becher et al.   NATURE IMMUNOLOGY

OpenCyto: An Open Source Infrastructure for Scalable, Robust, Reproducible, and Automated, End-to-End Flow Cytometry Data Analysis

(2014) Greg Finak et al.   PLoS Computational Biology

Critical assessment of automated flow cytometry data analysis techniques

(2013) Nima Aghaeepour et al.   NATURE METHODS

Automatic Classification of Cellular Expression by Nonlinear Stochastic Embedding (ACCENSE)

(2013) K. Shekhar et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

FCSTrans: An open source software system for FCS file conversion and data transformation

(2012) Yu Qian et al.   CYTOMETRY PART A

FlowRepository: A resource of annotated flow cytometry datasets associated with peer-reviewed publications

(2012) Josef Spidlen et al.   CYTOMETRY PART A

Cytometry by Time-of-Flight Shows Combinatorial Cytokine Expression and Virus-Specific Cell Niches within a Continuum of CD8+ T Cell Phenotypes

(2012) Evan W. Newell et al.   IMMUNITY

Translational Applications of Flow Cytometry in Clinical Practice

(2012) D. L. Jaye et al.   JOURNAL OF IMMUNOLOGY

Extracting a cellular hierarchy from high-dimensional cytometry data with SPADE

(2011) Peng Qiu et al.   NATURE BIOTECHNOLOGY

Understanding crossmatch testing in organ transplantation: A case-based guide for the general nephrologist

(2010) WILLIAM R MULLEY et al.   NEPHROLOGY

Anomaly detection

(2009) Varun Chandola et al.   ACM COMPUTING SURVEYS

Regularized gene selection in cancer microarray meta-analysis

(2009) Shuangge Ma et al.   BMC BIOINFORMATICS

Using flowViz to visualize flow cytometry data

(2008) D. Sarkar et al.   BIOINFORMATICS

Flow cytometry histograms: Transformations, resolution, and display

(2008) David Novo et al.   CYTOMETRY PART A