Article
Multidisciplinary Sciences
Fan Wu, Daniel Finkelstein-Shapiro, Mao Wang, Ilmari Rosenkampff, Arkady Yartsev, Torbjorn Pascher, Tu C. Nguyen-Phan, Richard Cogdell, Karl Borjesson, Tonu Pullerits
Summary: In this study, the authors experimentally investigated the dynamics of exciton-polaritons in a photosynthetic protein and found evidence of rapid energy transfer to dark polariton states.
NATURE COMMUNICATIONS
(2022)
Article
Multidisciplinary Sciences
Dan-Hong Li, Wenda Wang, Cuicui Zhou, Yan Zhang, Songhao Zhao, Yi-Ming Zhou, Rong-Yao Gao, Hai-Dan Yao, Li-Min Fu, Peng Wang, Jian-Ren Shen, Tingyun Kuang, Jian-Ping Zhang
Summary: The light-harvesting complex II (LHCII) of Bryopsis corticulans differs in chlorophyll and carotenoid compositions from that of spinach. Using time-resolved absorption spectroscopy, we investigated the ultrafast excitation dynamics of B-LHCII. Our results showed rapid photogeneration of Chl-Chl charge transfer (CT) species and revealed the transfer of singlet excitation between different chlorophyll and carotenoid molecules. The induction of Chl-Chl CT species by red-light excitation is a common occurrence for LHCIIs in light-harvesting form, as observed in S-LHCII.
Article
Chemistry, Physical
Gustavo Mondragon-Solorzano, Jacinto Sandoval-Lira, Jorge Nochebuena, G. Andres Cisneros, Joaquin Barroso-Flores
Summary: Various photosynthetic organisms have evolved to adapt to different lighting conditions on Earth by absorbing light of different wavelengths. Blastochloris viridis is capable of remarkably red-shifted absorption at 1015 nm, lower in energy than its main constituent pigment BChl-b. The red-shifting phenomenon is primarily attributed to the conformation and exciton delocalization of bacteriochlorin rings, while H-bonding pigment-protein interactions play a role in conformational stabilization and orientation.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION
(2022)
Review
Biochemistry & Molecular Biology
Heiko Lokstein, Gernot Renger, Jan P. Goetze
Summary: Chlorophylls, bacteriochlorophylls, and carotenoids are important pigments in photosynthetic organisms, playing a crucial role in light-harvesting and energy transformation. Recent research has made significant progress in understanding the structures and functions of light-harvesting complexes, reaction centers, and photosystems, highlighting the importance of these complexes in adapting to environmental conditions and regulating energy processes. The structural diversity in photosynthetic antenna designs is becoming increasingly apparent, with light-harvesting complexes commonly forming trimeric structures.
Article
Biochemistry & Molecular Biology
Noa Bezalel-Hazony, Hagit Zer, Shiri Nathanson, Sofia Shevtsov-Tal, Oren Ostersetzer-Biran, Nir Keren
Summary: The light environment in a mixing water column is highly variable, which poses challenges for photosynthesis. The ability of a marine Synechococcus strain to adapt to changes in illumination was examined. Significant and reversible changes in pigment fluorescence emission spectra were observed on a time scale of hours. This adaptation process may involve the detachment of hexamers from the phycobilisome structure.
Article
Chemistry, Physical
Hoang Long Nguyen, Thanh Nhut Do, Parveen Akhtar, Thomas L. C. Jansen, Jasper Knoester, Wenda Wang, Jian-Ren Shen, Petar H. Lambrev, Howe-Siang Tan
Summary: The marine green macroalga Bryopsis corticulans has unique light-harvesting complexes compared to those in plants, as revealed by fitting analysis of its LHCII. The fitting method's robustness in matching experimental data demonstrates its effectiveness in systems lacking precise pigment assignment and spatial information.
JOURNAL OF PHYSICAL CHEMISTRY B
(2021)
Article
Chemistry, Multidisciplinary
Kai Diao, Daniel J. Whitaker, Zehuan Huang, Hongwei Qian, Dongxing Ren, Liangliang Zhang, Zheng-Yi Li, Xiao-Qiang Sun, Tangxin Xiao, Leyong Wang
Summary: Researchers have successfully developed a novel material that can self-assemble into dispersed nanoparticles in water and achieve efficient white-light emission through a light-harvesting strategy. By co-assembling with cyanostilbene, the material shows potential for application in white-light encryption materials.
CHEMICAL COMMUNICATIONS
(2022)
Article
Chemistry, Physical
Vladislav Slama, Lorenzo Cupellini, Vincenzo Mascoli, Nicoletta Liguori, Roberta Croce, Benedetta Mennucci
Summary: This study uncovers the molecular mechanism for the formation and tuning of exciton-CT interactions in Lhca4 through molecular dynamics, multiscale quantum chemical calculations, and spectral simulations. The study shows that the coupling between exciton and CT states is extremely sensitive to tiny variations in the Chl dimer arrangement, explaining both the red-shifted bands and the switch between conformations with blue and red emission observed in single-molecule spectroscopy.
JOURNAL OF PHYSICAL CHEMISTRY LETTERS
(2023)
Article
Chemistry, Physical
Hongguang Li, Jingcheng Hao, Geping Zhang, Longyue Yu, Jingfei Chen, Renhao Dong, Nicolas Godbert
Summary: Artificial light-harvesting systems (ALHSs) are an attractive scientific topic, and a new type of binary ALHS using an ionic naphthalimide (NPI) derivative as a donor has been reported, which shows efficient energy transfer and tunable color by adjusting the acceptor/donor ratio.
JOURNAL OF PHYSICAL CHEMISTRY LETTERS
(2022)
Article
Chemistry, Physical
Sayan Maity, Pooja Sarngadharan, Vangelis Daskalakis, Ulrich Kleinekathoefer
Summary: This paper presents a new method for studying photosynthesis, focusing on the spectral densities of pigments in the CP29 complex of photosystem II. The role of pigments in the excitation energy transfer process is investigated, and the obtained spectral densities are compared with other light-harvesting complexes.
JOURNAL OF CHEMICAL PHYSICS
(2021)
Article
Engineering, Chemical
Chao Xiao, Na Guo, Zidong Liang, Zhencheng Huang, Wenjun Li, Mingyuan Xie, Fuli Zhao
Summary: We investigated the energy transfer mechanism in the phycobilisomes (PBSs) of the thermophilic cyanobacterium Thermosynechococcus vulcanus NIES 2134 (T. 2134) using cryo-EM models resolved at near-atomic resolution and sub-picosecond time-resolved fluorescence spectroscopy. We identified four time components and revealed the energy transfer channels and rates in the PBSs. This study contributes to our understanding of energy transfer mechanisms in PBSs.
Article
Energy & Fuels
Kyunglim Pyo, Sang Myeong Han, Hongmei Xu, Sukanya Saha, Guda Ramakrishna, Dongil Lee
Summary: The study investigated the size-dependent energy harvesting from nonthermalized, upper excited states of glutathione-protected gold clusters, showing that the upper excited-state energy can be efficiently harvested by an energy acceptor attached to the clusters. This opens up a new avenue for energy harvesting from nonthermalized upper excited states of gold clusters that would otherwise be lost as heat.
Article
Chemistry, Multidisciplinary
Yanrong Li, Sreehari Surendran Rajasree, Ga Young Lee, Jierui Yu, Jian-Hong Tang, Ruidong Ni, Guigen Li, Kendall N. Houk, Pravas Deria, Peter J. Stang
Summary: These two well-designed metallacages with tunable excited-state properties exhibit high optical characteristics and efficient energy transfer ability in an artificial light-harvesting system.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
(2021)
Article
Chemistry, Physical
Leonardo F. Calderon, Chern Chuang, Paul Brumer
Summary: Research shows that vibrations resonant with the energy difference between exciton states in photosynthetic dimers only have a marginal effect on energy transfer and quantum coherence compared to non-resonant vibrations under natural incoherent light excitation conditions.
JOURNAL OF PHYSICAL CHEMISTRY LETTERS
(2023)
Article
Chemistry, Physical
Vladimir I. Novoderezhkin
Summary: We compared the excitation dynamics in bacterial B850 antenna using different models and found that the modified Redfield method can reproduce the relaxation dynamics from higher exciton levels, but fails to explain the migration of quasi-equilibrated excitation over the B850 ring. Neglecting population-to-coherence transfers leads to unrealistic fast delocalization, while the standard Redfield method provides a better understanding of this migration, although it may be affected by artifacts from its one-phonon character.
PHYSICAL CHEMISTRY CHEMICAL PHYSICS
(2023)
Article
Chemistry, Physical
Mindaugas Macernis, Simona Streckaite, Radek Litvin, Andrew A. Pascal, Manuel J. Llansola-Portoles, Bruno Robert, Leonas Valkunas
Summary: In this study, the absorption and vibrational properties of allene-containing carotenoids were experimentally investigated. The electronic properties of vaucheriaxanthin were successfully explained by calculations, while fucoxanthin and butanoyloxyfucoxanthin required long-range corrections to accurately determine their absorption position. Resonance Raman spectra of these carotenoids were perturbed by the presence of the allene group, which could be attributed to the increased Raman intensity of the C=C antisymmetric stretching mode in the carotenoid chain.
JOURNAL OF PHYSICAL CHEMISTRY A
(2022)
Article
Plant Sciences
Callum Gray, Tiejun Wei, Tomas Polivka, Vangelis Daskalakis, Christopher D. P. Duffy
Summary: Higher plants have a defense mechanism called Non-Photochemical Quenching (NPQ) to protect themselves from intense light. This involves the participation of energy transfer and the S-1 state. Previous models of NPQ have limitations and this study aims to address them by parameterizing the vibronic structure and relaxation dynamics of lutein, as well as analyzing multiple minima. The results suggest that the previous quenching mechanism based on S-1 energy transfer is unlikely, and the real mechanism may involve short-range interaction and/or non-trivial inter-molecular states.
FRONTIERS IN PLANT SCIENCE
(2022)
Article
Multidisciplinary Sciences
Pu Qian, Alastair T. Gardiner, Ivana Simova, Katerina Naydenova, Tristan Croll, Philip J. Jackson, Nupur, Miroslav Kloz, Petra Cubakova, Marek Kuzma, Yonghui Zeng, Pablo Castro-Hartmann, Bart van Knippenberg, Kenneth N. Goldie, David Kaftan, Pavel Hrouzek, Jan Hajek, Jon Agirre, C. Alistair Siebert, David Bina, Kasim Sader, Henning Stahlberg, Roman Sobotka, Christopher J. Russo, Tomas Polivka, C. Neil Hunter, Michal Koblizek
Summary: Phototrophic Gemmatimonadetes have evolved the ability to use solar energy through horizontal gene transfer. The study reveals the unique solar energy harvesting and trapping architecture of Gemmatimonas phototrophica, as well as the flow of energy within the complex.
Article
Chemistry, Physical
Tuhin Khan, Valentyna Kuznetsova, Maria Agustina Dominguez-Martin, Cheryl A. Kerfeld, Tomas Polivka
Summary: This study investigated the ultrafast spectroscopic response of OCP and HCPs in cyanobacteria, focusing on the reaction of carotenoid and amino acids under UV excitation. The results showed enhanced signals of canthaxanthin and formation of canthaxanthin radical cation under UV excitation, as well as accelerated product formation in the OCP photocycle through excess energy excitation and direct excitation of amino acids.
Article
Chemistry, Physical
Vaclav Sebelik, Christopher D. P. Duffy, Erika Keil, Tomas Polivka, Juergen Hauer
Summary: This article summarizes the relaxation dynamics of carotenoids after photon excitation, with special emphasis on the S* state. It also discusses the techniques needed to better describe energy dissipation effects.
JOURNAL OF PHYSICAL CHEMISTRY B
(2022)
Article
Plant Sciences
Jana Knoppova, Roman Sobotka, Jianfeng Yu, Martina Beckova, Jan Pilny, Joko P. Trinugroho, Ladislav Csefalvay, David Bina, Peter J. Nixon, Josef Komenda
Summary: Analysis of isolated assembly complexes provides new insights into the early stages of photosystem II biogenesis. These complexes contain information about the PSII subunits and proteins and assembly factors associated with its assembly process.
Correction
Multidisciplinary Sciences
Petra Skotnicova, Hristina Staleva-Musto, Valentyna Kuznetsova, David Bina, Minna M. Konert, Shan Lu, Tomas Polivka, Roman Sobotka
NATURE COMMUNICATIONS
(2022)
Article
Multidisciplinary Sciences
Maria Agustina Dominguez-Martin, Paul Sauer, Henning Kirst, Markus Sutter, David Bina, Basil J. Greber, Eva Nogales, Tomas Polivka, Cheryl A. Kerfeld
Summary: In this study, the structures of Phycobilisome (PBS) in cyanobacteria were solved using cryogenic electron microscopy. The researchers discovered a previously unknown linker protein and revealed different conformational states of the antenna. Moreover, they elucidated the energy transfer pathways within PBS and provided insights into the control of cyanobacterial light harvesting, which has implications for bioengineering light-harvesting systems.
Article
Plant Sciences
Ivana Simova, Valentyna Kuznetsova, Alastair T. Gardiner, Vaclav Sebelik, Michal Koblizek, Marcel Fuciman, Tomas Polivka
Summary: This study investigates the behavior of the LH2 complex from Rhodoblastus acidophilus after excitation of the Soret band using transient absorption data. The results suggest that there is no Soret-to-Car energy transfer pathway in the LH2 complex. In addition, a spectrally rich pattern observed during the rhodopin glucoside ground state bleaching is assigned to an electrochromic shift.
PHOTOSYNTHESIS RESEARCH
(2022)
Article
Chemistry, Physical
Emrah Ozcan, Valentyna Kuznetsova, Gurkan Kesan, Marcel Fuciman, Radek Litvin, Tomas Polivka
Summary: Carotenoids are natural compounds that play multiple roles in biological systems. The interaction of carotenoid astaxanthin with Zn2+ and Cu2+ ions results in significant changes in excited-state dynamics, leading to enhanced charge transfer characteristics and shortened lifetimes.
JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY A-CHEMISTRY
(2023)
Article
Chemistry, Multidisciplinary
Gurkan Kesan, Emrah Ozcan, Pavel Chabera, Tomas Polivka, Marcel Fuciman
Summary: This study investigates the influence of applied external voltage on the excited-state properties of 8'-apo-beta-carotenal in acetonitrile. The results show that the amplitude of the signal associated with the ICT state can be tuned by applying an external voltage.
Article
Chemistry, Physical
Valentyna Kuznetsova, Marcel Fuciman, Tomas Polivka
Summary: This article investigates the excited states of carotenoids and finds differences between the S-UV and S-n states, each initiating specific relaxation pathways.
PHYSICAL CHEMISTRY CHEMICAL PHYSICS
(2023)
Review
Chemistry, Physical
Donatas Zigmantas, Tomas Polivka, Petter Persson, Villy Sundstroem
Summary: The development and progress of laser technology have enabled deeper research into the mechanisms of photosynthesis and solar energy conversion. Through the study of ultrafast pulses, there has been significant advancement in understanding complex biological systems and novel materials.
CHEMICAL PHYSICS REVIEWS
(2022)
Article
Biochemistry & Molecular Biology
Brandon P. Russell, David J. Vinyard
Summary: The Mn4CaO5 oxygen-evolving complex in Photosystem II is crucial for water oxidation. D1 residue R334 participates in proton release and interacts with PsbO. A D1-R334G mutant destabilizes the OEC but stabilizes the S2 intermediate.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
(2024)
Article
Biochemistry & Molecular Biology
Alexander A. Bulychev, Tatiana S. Strelets
Summary: Excitable cells of higher plants and characean algae respond to stressful stimuli by generating action potentials that influence chlorophyll fluorescence and photosynthesis for an extended period of time. While plant leaves exhibit a reversible depression in the efficiency of photosystem II reaction after an individual action potential, characean algae show long-lasting oscillations of photosystem II reaction efficiency after firing an action potential. This study investigates the possible mechanisms behind these oscillations and suggests that they are a result of metabolic rearrangements in chloroplasts and the cyclosis cessation-recovery cycle induced by calcium influx during action potentials. The findings also indicate that fluidic communications between different cell regions play a role in these oscillations, and the inhibition of oscillations occurs when these communications are restricted or eliminated.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
(2024)
Article
Biochemistry & Molecular Biology
Dmitry Zlenko, Elena A. Protasova, Georgy Tsoraev, Nikolai N. Sluchanko, Dmitry A. Cherepanov, Thomas Friedrich, Baosheng Ge, Song Qin, Eugene G. Maksimov, Andrew B. Rubin
Summary: The conformation of chromophores in isolated phycobiliproteins is heterogeneous, but not in the entire phycobilisome (PBS). Under low-energy excitation, there is no significant uphill energy transfer from the core to the peripheral rods of the PBS, while transfer from the terminal emitters to bulk allophycocyanin chromophores is highly probable.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
(2024)
Article
Biochemistry & Molecular Biology
Makio Yokono, Chiyo Noda, Jun Minagawa
Summary: This paper investigates the energy transfer between Photosystem II and Photosystem I in Arabidopsis thaliana, and finds that the fast spillover is reversibly regulated depending on pH.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
(2024)