Application of cell-free DNA sequencing in characterization of bloodborne microbes and the study of microbe-disease interactions

Analytical and clinical validation of a microbial cell-free DNA sequencing test for infectious disease

(2019) Timothy A. Blauwkamp et al.   Nature Microbiology

Analysis of microbial sequences in plasma cell-free DNA for early-onset breast cancer patients and healthy females

(2018) Yu-Feng Huang et al.   BMC Medical Genomics

Liquid biopsy for infectious diseases: sequencing of cell-free plasma to detect pathogen DNA in patients with invasive fungal disease

(2018) David K. Hong et al.   DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE

Accurate detection of complex structural variations using single-molecule sequencing

(2018) Fritz J. Sedlazeck et al.   NATURE METHODS

Multiscale Analysis of Independent Alzheimer’s Cohorts Finds Disruption of Molecular, Genetic, and Clinical Networks by Human Herpesvirus

(2018) Ben Readhead et al.   NEURON

Single cell transcriptome analysis of MCF-7 reveals consistently and inconsistently expressed gene groups each associated with distinct cellular localization and functions

(2018) Yih-Shien Chiang et al.   PLoS One

Urinary cell-free DNA is a versatile analyte for monitoring infections of the urinary tract

(2018) Philip Burnham et al.   Nature Communications

Salivary Exosome and Cell-Free DNA for Cancer Detection

(2018) Kyung-A Hyun et al.   Micromachines

Sequencing of Circulating Cell-free DNA during Pregnancy

(2018) Diana W. Bianchi et al.   NEW ENGLAND JOURNAL OF MEDICINE

Assessment of metagenomic Nanopore and Illumina sequencing for recovering whole genome sequences of chikungunya and dengue viruses directly from clinical samples

(2018) Liana E. Kafetzopoulou et al.   Eurosurveillance

Numerous uncharacterized and highly divergent microbes which colonize humans are revealed by circulating cell-free DNA

(2017) Mark Kowarsky et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Detection of somatic mutations in cell-free DNA in plasma and correlation with overall survival in patients with solid tumors

(2017) Meenakshi Mehrotra et al.   Oncotarget

Non-blood circulating tumor DNA detection in cancer

(2017) Muyun Peng et al.   Oncotarget

Advancements in Next-Generation Sequencing

(2016) Shawn E. Levy et al.   Annual Review of Genomics and Human Genetics

Deep sequencing and human antibody repertoire analysis

(2016) Scott D Boyd et al.   CURRENT OPINION IN IMMUNOLOGY

Mechanisms of HBV-induced hepatocellular carcinoma

(2016) Massimo Levrero et al.   JOURNAL OF HEPATOLOGY

Cell-free DNA (cfDNA): Clinical Significance and Utility in Cancer Shaped By Emerging Technologies

(2016) S. Volik et al.   MOLECULAR CANCER RESEARCH

Single-cell genome sequencing: current state of the science

(2016) Charles Gawad et al.   NATURE REVIEWS GENETICS

Next-generation sequencing diagnostics of bacteremia in septic patients

(2016) Silke Grumaz et al.   Genome Medicine

How to Optimize the Use of Blood Cultures for the Diagnosis of Bloodstream Infections? A State-of-the Art

(2016) Brigitte Lamy et al.   Frontiers in Microbiology

Identification of Circulating Tumor DNA for the Early Detection of Small-cell Lung Cancer

(2016) Lynnette Fernandez-Cuesta et al.   EBioMedicine

Urine Cell-Free DNA Integrity Analysis for Early Detection of Prostate Cancer Patients

(2015) Samanta Salvi et al.   DISEASE MARKERS

Exome Sequencing of Cell-Free DNA from Metastatic Cancer Patients Identifies Clinically Actionable Mutations Distinct from Primary Disease

(2015) Timothy M. Butler et al.   PLoS One

Noninvasive monitoring of infection and rejection after lung transplantation

(2015) Iwijn De Vlaminck et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rapid metagenomic identification of viral pathogens in clinical samples by real-time nanopore sequencing analysis

(2015) Alexander L. Greninger et al.   Genome Medicine

Noninvasive Saliva-basedEGFRGene Mutation Detection in Patients with Lung Cancer

(2014) Fang Wei et al.   AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE

Impact of urinary tract infection on allograft function after kidney transplantation

(2014) Ella J. Ariza-Heredia et al.   CLINICAL TRANSPLANTATION

Bacteria and tumours: causative agents or opportunistic inhabitants?

(2013) Joanne Cummins et al.   Infectious Agents and Cancer

Cultivation of unculturable soil bacteria

(2012) Van H.T. Pham et al.   TRENDS IN BIOTECHNOLOGY