Oceanographic habitat and the coral microbiomes of urban-impacted reefs

Transport Between Palau and the Eastern Coral Triangle: Larval Connectivity or Near Misses

(2018) Stephen G. Monismith et al.   GEOPHYSICAL RESEARCH LETTERS

Connecting Flow over Complex Terrain to Hydrodynamic Roughness on a Coral Reef

(2018) Justin S. Rogers et al.   JOURNAL OF PHYSICAL OCEANOGRAPHY

Variance Inflation Factor and Condition Number in multiple linear regression

(2018) R. Salmerón et al.   JOURNAL OF STATISTICAL COMPUTATION AND SIMULATION

Adaptation to reef habitats through selection on the coral animal and its associated microbiome

(2018) Madeleine J. H. van Oppen et al.   MOLECULAR ECOLOGY

Dynamics of coral-associated microbiomes during a thermal bleaching event

(2018) Wirulda Pootakham et al.   MicrobiologyOpen

Fine grained compositional analysis of Port Everglades Inlet microbiome using high throughput DNA sequencing

(2018) Lauren O’Connell et al.   PeerJ

Inter-domain microbial diversity within the coral holobiont Siderastrea siderea from two depth habitats

(2018) Guido Bonthond et al.   PeerJ

Changes in shallow-reef community composition along environmental gradients on the East African coast

(2017) Sean N. Porter et al.   MARINE BIOLOGY

Dongsha Atoll: A potential thermal refuge for reef-building corals in the South China Sea

(2017) Konstantin S. Tkachenko et al.   MARINE ENVIRONMENTAL RESEARCH

Bacterial community dynamics are linked to patterns of coral heat tolerance

(2017) Maren Ziegler et al.   Nature Communications

Genomic patterns in Acropora cervicornis show extensive population structure and variable genetic diversity

(2017) Crawford Drury et al.   Ecology and Evolution

Water flow buffers shifts in bacterial community structure in heat-stressed Acropora muricata

(2017) Sonny T. M. Lee et al.   Scientific Reports

Tenacibaculum sediminilitoris sp. nov., isolated from a tidal flat

(2016) Sooyeon Park et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

The microbiome of coral surface mucus has a key role in mediating holobiont health and survival upon disturbance

(2016) Bettina Glasl et al.   ISME Journal

Ocean circulation drives heterogeneous recruitments and connectivity among coral populations on the North West Shelf of Australia

(2016) Ming Feng et al.   JOURNAL OF MARINE SYSTEMS

Wave energy level and geographic setting correlate with Florida beach water quality

(2016) Zhixuan Feng et al.   MARINE POLLUTION BULLETIN

Coral microbial community dynamics in response to anthropogenic impacts near a major city in the central Red Sea

(2016) Maren Ziegler et al.   MARINE POLLUTION BULLETIN

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Year-Long Monitoring of Physico-Chemical and Biological Variables Provide a Comparative Baseline of Coral Reef Functioning in the Central Red Sea

(2016) Anna Roik et al.   PLoS One

Overfishing and nutrient pollution interact with temperature to disrupt coral reefs down to microbial scales

(2016) Jesse R. Zaneveld et al.   Nature Communications

Long distance dispersal and vertical gene flow in the Caribbean brooding coral Porites astreoides

(2016) Xaymara M. Serrano et al.   Scientific Reports

Coastal connectivity and spatial subsidy from a microbial perspective

(2016) Christin Säwström et al.   Ecology and Evolution

Ecological solutions to reef degradation: optimizing coral reef restoration in the Caribbean and Western Atlantic

(2016) Diego Lirman et al.   PeerJ

Bacterial community structure and function shift along a successional series of tidal flats in the Yellow River Delta

(2016) Xiaofei Lv et al.   Scientific Reports

Tenacibaculum finnmarkense sp. nov., a fish pathogenic bacterium of the family Flavobacteriaceae isolated from Atlantic salmon

(2015) Sverre Bang Småge et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Habitat-specific environmental conditions primarily control the microbiomes of the coral Seriatopora hystrix

(2015) Olga Pantos et al.   ISME Journal

Sediment plumes induced by the Port of Miami dredging: Analysis and interpretation using Landsat and MODIS data

(2015) Brian B. Barnes et al.   REMOTE SENSING OF ENVIRONMENT

Field observations of wave-driven circulation over spur and groove formations on a coral reef

(2015) Justin S. Rogers et al.   JOURNAL OF GEOPHYSICAL RESEARCH-OCEANS

Geographic differences in vertical connectivity in the Caribbean coralMontastraea cavernosadespite high levels of horizontal connectivity at shallow depths

(2014) X. Serrano et al.   MOLECULAR ECOLOGY

Local genomic adaptation of coral reef-associated microbiomes to gradients of natural variability and anthropogenic stressors

(2014) L. W. Kelly et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Accuracy assessment of global barotropic ocean tide models

(2014) D. Stammer et al.   REVIEWS OF GEOPHYSICS

Sizes, shapes, and patterns of coral reefs in the Maldives, Indian Ocean: the influence of wind, storms, and precipitation on a major tropical carbonate platform

(2013) Eberhard Gischler et al.   CARBONATES AND EVAPORITES

Bacterial profiling of White Plague Disease across corals and oceans indicates a conserved and distinct disease microbiome

(2013) Cornelia Roder et al.   MOLECULAR ECOLOGY

Determining the Extent and Characterizing Coral Reef Habitats of the Northern Latitudes of the Florida Reef Tract (Martin County)

(2013) Brian K. Walker et al.   PLoS One

Bleaching Susceptibility and Recovery of Colombian Caribbean Corals in Response to Water Current Exposure and Seasonal Upwelling

(2013) Elisa Bayraktarov et al.   PLoS One

Hydrodynamics of spur and groove formations on a coral reef

(2013) Justin S. Rogers et al.   JOURNAL OF GEOPHYSICAL RESEARCH-OCEANS

A Review of Reef Restoration and Coral Propagation Using the Threatened Genus Acropora in the Caribbean and Western Atlantic

(2012) CN Young et al.   BULLETIN OF MARINE SCIENCE

Observations of the thermal environment on Red Sea platform reefs: a heat budget analysis

(2011) K. A. Davis et al.   CORAL REEFS

A numerical model of wave- and current-driven nutrient uptake by coral reef communities

(2011) Zhenlin Zhang et al.   ECOLOGICAL MODELLING

Shifts in bacterial communities of two caribbean reef-building coral species affected by white plague disease

(2011) Anny Cárdenas et al.   ISME Journal

Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage

(2011) Chris L Dupont et al.   ISME Journal

Severe 2010 Cold-Water Event Caused Unprecedented Mortality to Corals of the Florida Reef Tract and Reversed Previous Survivorship Patterns

(2011) Diego Lirman et al.   PLoS One

Flow effects on benthic grazing on phytoplankton by a Caribbean reef

(2010) Stephen G. Monismith et al.   LIMNOLOGY AND OCEANOGRAPHY

Population biology of Porites astreoides and Diploria strigosa on a shallow Caribbean reef

(2010) PJ Edmunds   MARINE ECOLOGY PROGRESS SERIES

Microbial functional structure ofMontastraea faveolata, an important Caribbean reef-building coral, differs between healthy and yellow-band diseased colonies

(2009) Nikole E. Kimes et al.   ENVIRONMENTAL MICROBIOLOGY

Physical and biological responses to Hurricane Katrina (2005) in a 1/25° nested Gulf of Mexico HYCOM

(2009) Michelle M. Gierach et al.   JOURNAL OF MARINE SYSTEMS

The Effects of Tides and Oscillatory Winds on the Subtidal Inner-Shelf Cross-Shelf Circulation

(2009) Renato Castelao et al.   JOURNAL OF PHYSICAL OCEANOGRAPHY

Parametric Sensitivity Analysis of the WAVEWATCH III Model

(2009) Beng-Chun Lee et al.   TERRESTRIAL ATMOSPHERIC AND OCEANIC SCIENCES

Global distribution and diversity of coral-associatedArchaeaand their possible role in the coral holobiont nitrogen cycle

(2008) Nachshon Siboni et al.   ENVIRONMENTAL MICROBIOLOGY