Identifying nonlinear dynamical systems via generative recurrent neural networks with applications to fMRI

Task representations in neural networks trained to perform many cognitive tasks

(2019) Guangyu Robert Yang et al.   NATURE NEUROSCIENCE

A note on the validity of cross-validation for evaluating autoregressive time series prediction

(2018) Christoph Bergmeir et al.   COMPUTATIONAL STATISTICS & DATA ANALYSIS

Machine Learning: Deepest Learning as Statistical Data Assimilation Problems

(2018) Henry D. I. Abarbanel et al.   NEURAL COMPUTATION

Inferring single-trial neural population dynamics using sequential auto-encoders

(2018) Chethan Pandarinath et al.   NATURE METHODS

Recurrent Neural Networks in Mobile Sampling and Intervention

(2018) Georgia Koppe et al.   SCHIZOPHRENIA BULLETIN

Dynamic models of large-scale brain activity

(2017) Michael Breakspear   NATURE NEUROSCIENCE

A global brain state underliesC. eleganssleep behavior

(2017) Annika L. A. Nichols et al.   SCIENCE

A state space approach for piecewise-linear recurrent neural networks for identifying computational dynamics from neural measurements

(2017) Daniel Durstewitz   PLoS Computational Biology

Synthesis of recurrent neural networks for dynamical system simulation

(2016) Adam P. Trischler et al.   NEURAL NETWORKS

Discovering governing equations from data by sparse identification of nonlinear dynamical systems

(2016) Steven L. Brunton et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Training Excitatory-Inhibitory Recurrent Neural Networks for Cognitive Tasks: A Simple and Flexible Framework

(2016) H. Francis Song et al.   PLoS Computational Biology

Chaotic itinerancy and its roles in cognitive neurodynamics

(2015) Ichiro Tsuda   CURRENT OPINION IN NEUROBIOLOGY

Amphetamine Exerts Dose-Dependent Changes in Prefrontal Cortex Attractor Dynamics during Working Memory

(2015) C. C. Lapish et al.   JOURNAL OF NEUROSCIENCE

Deep learning

(2015) Yann LeCun et al.   NATURE

A New Initiative on Precision Medicine

(2015) Francis S. Collins et al.   NEW ENGLAND JOURNAL OF MEDICINE

Fight sample degeneracy and impoverishment in particle filters: A review of intelligent approaches

(2014) Tiancheng Li et al.   EXPERT SYSTEMS WITH APPLICATIONS

Dynamic connectivity states estimated from resting fMRI Identify differences among Schizophrenia, bipolar disorder, and healthy control subjects

(2014) Barnaly Rashid et al.   Frontiers in Human Neuroscience

Temporal unpredictability of a stimulus sequence affects brain activation differently depending on cognitive task demands

(2014) Georgia Koppe et al.   NEUROIMAGE

Analytical approximations of the firing rate of an adaptive exponential integrate-and-fire neuron in the presence of synaptic noise

(2014) Loreen Hertäg et al.   Frontiers in Computational Neuroscience

Dynamic functional connectivity analysis reveals transient states of dysconnectivity in schizophrenia

(2014) E. Damaraju et al.   NeuroImage-Clinical

Dynamic functional connectomics signatures for characterization and differentiation of PTSD patients

(2013) Xiang Li et al.   HUMAN BRAIN MAPPING

Context-dependent computation by recurrent dynamics in prefrontal cortex

(2013) Valerio Mante et al.   NATURE

Prefrontal Cortical Mechanisms Underlying Individual Differences in Cognitive Flexibility and Stability

(2012) Diana J. N. Armbruster et al.   JOURNAL OF COGNITIVE NEUROSCIENCE

Detecting Causality in Complex Ecosystems

(2012) G. Sugihara et al.   SCIENCE

An Approximation to the Adaptive Exponential Integrate-and-Fire Neuron Model Allows Fast and Predictive Fitting to Physiological Data

(2012) Loreen Hertäg et al.   Frontiers in Computational Neuroscience

Robust Transient Dynamics and Brain Functions

(2011) Mikhail I. Rabinovich et al.   Frontiers in Computational Neuroscience

Attracting Dynamics of Frontal Cortex Ensembles during Memory-Guided Decision-Making

(2011) Emili Balaguer-Ballester et al.   PLoS Computational Biology

Approximate Methods for State-Space Models

(2010) Shinsuke Koyama et al.   JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION

Statistical inference for noisy nonlinear ecological dynamic systems

(2010) Simon N. Wood   NATURE

Multivariate dynamical systems models for estimating causal interactions in fMRI

(2010) Srikanth Ryali et al.   NEUROIMAGE

The encoding of alternatives in multiple-choice decision-making

(2009) Larissa Albantakis et al.   BMC NEUROSCIENCE

A new look at state-space models for neural data

(2009) Liam Paninski et al.   JOURNAL OF COMPUTATIONAL NEUROSCIENCE

Gaussian-Process Factor Analysis for Low-Dimensional Single-Trial Analysis of Neural Population Activity

(2009) Byron M. Yu et al.   JOURNAL OF NEUROPHYSIOLOGY

The Dual-State Theory of Prefrontal Cortex Dopamine Function with Relevance to Catechol-O-Methyltransferase Genotypes and Schizophrenia

(2008) Daniel Durstewitz et al.   BIOLOGICAL PSYCHIATRY

NEUROSCIENCE: Transient Dynamics for Neural Processing

(2008) M. Rabinovich et al.   SCIENCE

Iterative Solution of Piecewise Linear Systems

(2008) Luigi Brugnano et al.   SIAM JOURNAL ON SCIENTIFIC COMPUTING

Transient Cognitive Dynamics, Metastability, and Decision Making

(2008) Mikhail I. Rabinovich et al.   PLoS Computational Biology